Evidence map›Paper›PMID 26152572›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

Novel glucosinolate composition lacking 4-methylthio-3-butenyl glucosinolate in Japanese white radish (Raphanus sativus L.).

Masahiko Ishida, Tomohiro Kakizaki, Yasujiro Morimitsu, Takayoshi Ohara, Katsunori Hatakeyama, Hitoshi Yoshiaki, Junna Kohori, Takeshi Nishio

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Large insertion in radishFrontiers in plant science · 2023
    Article
  4. Article
  5. Transcriptome analysis of melatonin regulating the transformation of glucoraphanin to sulforaphane in broccoli hairy roots.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  6. Identification of genome-wide single-nucleotide polymorphisms among geographically diverse radish accessions.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020
    Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Masahiko IshidaNARO Institute of Vegetable and Tea Science, Tsukuba Vegetable Research Station, 3-1-1 Kannondai, Tsukuba, 305-8666, Japan.
Tomohiro KakizakiNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie, 514-2392, Japan.
Yasujiro MorimitsuThe Department of Food and Nutritional Sciences, The Graduate School of Humanities and Sciences, Ochanomizu University, 2-1-1 Otsuka, Bunkyo-ku, Tokyo, 112-8610, Japan.
Takayoshi OharaNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie, 514-2392, Japan.
Katsunori HatakeyamaNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie, 514-2392, Japan.
Hitoshi YoshiakiNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie, 514-2392, Japan.
Junna KohoriNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie, 514-2392, Japan.
Takeshi NishioGraduate School of Agricultural Science, Tohoku University, 1-1 Tsutsumidori Amamiya-machi, Aoba-ku, Sendai, Miyagi, 981-8555, Japan. nishio@bios.tohoku.ac.jp.
Institute of Vegetable and Floriculture Science · JPOchanomizu University · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageGenetic analysis and gene mapping of the 4-methylthio-3-butenyl glucosinolate-less trait of white radish were performed and a white radish cultivar with new glucosinolate composition was developed. A spontaneous mutant having significantly low 4-methylthio-3-butenyl glucosinolate (4MTB-GSL) content was identified from a landrace of Japanese white radish (Raphanus sativus L.) through intensive evaluation of glucosinolate profiles of 632 lines including genetic resources and commercial cultivars using high-performance liquid chromatography (HPLC) analysis. A line lacking 4MTB-GSL was developed using the selected mutant as a gene source. Genetic analyses of F1, F2, and BC1F1 populations of this line suggested that the 4MTB-GSL-less trait is controlled by a single recessive allele. Using SNP and SCAR markers, 96 F2 plants were genotyped, and a linkage map having nine linkage groups with a total map distance of 808.3 cM was constructed. A gene responsible for the 4MTB-GSL-less trait was mapped between CL1753 and CL5895 at the end of linkage group 1. The genetic distance between these markers was 4.2 cM. By selfing and selection of plants lacking 4MTB-GSL, a new cultivar, 'Daikon parental line No. 5', was successfully developed. This cultivar was characterized by glucoerucin, which accounted for more than 90% of the total glucosinolates (GSLs). The total GSL content in roots was ca. 12 μmol/g DW, significantly lower than those in common white radish cultivars. Significance of this line in radish breeding is discussed.

Indexed as

AllelesChromatography, High Pressure LiquidChromosome MappingGenes, PlantGenes, RecessiveGenetic LinkageGenotypeGlucosinolatesPlant BreedingPolymorphism, Single NucleotideRaphanus4-methylthio-3-butenyl glucosinolateGlucosinolates

Identifiers

PMID26152572
OpenAlexW781390091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.