Evidence map›Paper›PMID 26152569›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

QTL mapping of thrips resistance in pepper.

Awang Maharijaya, Ben Vosman, Greet Steenhuis-Broers, Koen Pelgrom, Agus Purwito, Richard G F Visser, Roeland E Voorrips

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Overview of Biotic Stresses in Pepper (International journal of molecular sciences · 2020
    Review
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Awang MaharijayaWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Ben VosmanWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Greet Steenhuis-BroersWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Koen PelgromWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Agus PurwitoBogor Agricultural University, Jalan Raya Darmaga, 16680, Bogor, Indonesia.
Richard G F VisserWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands.
Roeland E VoorripsWageningen UR-Plant Breeding, Wageningen University and Research Center., P.O. Box 386, 6700 AJ, Wageningen, The Netherlands. roeland.voorrips@wur.nl.
Wageningen University & Research · NLIPB University · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA QTL for thrips resistance on pepper chromosome 6 was identified and validated. This QTL affects thrips larval development and explains 50% of the variation. Thrips is one of the most damaging pests in pepper (Capsicum). Resistance to thrips was identified in Capsicum annuum. This study was aimed at the elucidation of the genetic background of thrips resistance in Capsicum through QTL mapping. The QTL analysis was carried out for Frankliniella occidentalis resistance in an F2 population consisting of 196 plants derived from an interspecific cross between the highly resistant C. annuum AC 1979 as female parent and the highly susceptible C. chinense 4661 as male parent. Fifty-seven SSR, 109 AFLP, and 5 SNP markers were used to construct a genetic map with a total length of 1636 cM. Damage caused by larvae and the survival of first and second instar larval stages observed in a no-choice test were used as parameters of resistance. Interval mapping detected one QTL for each of these parameters, all co-localizing near the same marker on chromosome 6. Use of this marker as co-factor in a multiple-QTL mapping analysis failed to uncover any additional QTLs. This QTL explained about 50% of the genetic variation, and the resistance allele of this QTL was inherited from the resistant parent. Thrips resistance was not linked to trichome density.

Indexed as

Quantitative Trait LociThysanopteraAnimalsCapsicumChromosome MappingChromosomes, PlantCrosses, GeneticGenetic MarkersLarvaTrichomesGenetic Markers

Identifiers

PMID26152569
PMCPMC4572063
OpenAlexW1504954928

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.