Evidence map›Paper›PMID 26151828›Full record

ArticlePloS one2015

Practical Prediction of Ten Common Streptococcus pneumoniae Serotypes/Serogroups in One PCR Reaction by Multiplex Ligation-Dependent Probe Amplification and Melting Curve (MLPA-MC) Assay in Shenzhen, China.

Lijuan Wu, Xiaomao Yin, Lei Zheng, Jianhua Zou, Ping Jin, Yanwei Hu, Timothy Kudinha, Fanrong Kong, Xu Chen, Qian Wang

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
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2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Lijuan WuLaboratory Medical Centre, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China; Clinical Laboratory, Bao'an Maternity and Child Health Hospital, Shenzhen, Guangdong Province, China.
Xiaomao YinClinical Laboratory, The Fifth Affiliated Hospital of Southern Medical University, Guangzhou, Guangdong Province, China.
Lei ZhengLaboratory Medical Centre, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China.
Jianhua ZouClinical Laboratory, Bao'an Maternity and Child Health Hospital, Shenzhen, Guangdong Province, China.
Ping JinClinical Laboratory, Bao'an Maternity and Child Health Hospital, Shenzhen, Guangdong Province, China.
Yanwei HuLaboratory Medical Centre, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China.
Timothy KudinhaCharles Sturt University, Leeds Parade, Orange, New South Wales, Australia.
Fanrong KongCentre for Infectious Diseases and Microbiology, Institute of Clinical Pathology and Medical Research-Pathology West, Westmead Hospital, New South Wales, Australia.
Xu ChenClinical Laboratory, Bao'an Maternity and Child Health Hospital, Shenzhen, Guangdong Province, China.
Qian WangLaboratory Medical Centre, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundStreptococcus pneumoniae has more than 95 distinct serotypes described to date. However, only certain serotypes are more likely to cause pneumococcal diseases. Thus serotype surveillance is important for vaccine formula design as well as in post-vaccine serotype shift monitor. The goal of this study was to develop a practical screening assay for ten Shenzhen China common pneumococcal serotypes/serogroups in one molecular reaction.

methodsA molecular assay, based on multiplex ligation-dependent probe amplification (MLPA) and melting curve (MC) analysis, was developed in an integrated approach (MLPA-MC) for the detection of ten capsular serotypes/serogroups 4, 6 (6A/6B/6C/6D), 9V/9A, 14, 15F/15A, 15B/15C, 18 (18F/18A/18B/18C), 19F, 19A and 23F. We designed serotype/serogroup-specific MLPA probes and fluorescent detection probes to discriminate the different serotypes/serogroups in one molecular reaction. The three steps of MLPA-MC assay are continuous reactions in one well detected by LightCycler 480. A total of 210 S. pneumoniae isolates from our local Maternity and Child Health Hospital were randomly chosen to evaluate the assay against published multiplex PCR assays.

resultsOur results showed that 198 (94.3%) of S. pneumoniae isolates were type-able by our assays and the results were in complete concordance with the published multiplex PCRs. Using the MLPA-MC assay, 96 S. pneumoniae isolates could be typed within 3 hours with limited hands-on time. This serotype/serogroup-screening assay can be easily modified or extended by modification of the serotype/serogroup-specific MLPA probes combinations according to the needs of different laboratories.

conclusionsWe recommend use of this assay as a starting point for screening serotype/serogroup frequencies. There is a need for this assay to be combined with other molecular typing assays, like published serotype specific PCRs, or even the Quellung reaction for serotype confirmation.

Indexed as

ChildChinaDNA, BacterialHospitalsHumansMolecular TypingMultiplex Polymerase Chain ReactionNucleic Acid DenaturationPneumococcal InfectionsReproducibility of ResultsSerotypingStreptococcus pneumoniaeTransition TemperatureDNA, Bacterial

Identifiers

PMID26151828
PMCPMC4495002

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.