Evidence map›Paper›PMID 26151430›Full record

ArticleBiochemistry2015

Rapid kinetics of dehalogenation promoted by iodotyrosine deiodinase from human thyroid.

Kostyantyn D Bobyk, David P Ballou, Steven E Rokita

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Biochemistry · 2024
    Article
  3. Misregulation of bromotyrosine compromises fertility in maleProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Evolutionary aspects of the Viridiplantae nitroreductases.Journal, genetic engineering & biotechnology · 2020
    Article
  9. Redox control of iodotyrosine deiodinase.Protein science : a publication of the Protein Society · 2019
    Article
  10. Article
  11. The importance of a halotyrosine dehalogenase forThe Journal of biological chemistry · 2018
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Functional analysis of iodotyrosine deiodinase from drosophila melanogaster.Protein science : a publication of the Protein Society · 2016
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Kostyantyn D Bobyk†Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, United States.
David P Ballou‡Department of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.
Steven E Rokita†Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, United States.
University of Maryland, College Park · USUniversity of Michigan–Ann Arbor · US

Funding

Reductive Dehalogenation in Mammals by Iodotyrosine DeiodinaseR01DK084186 · NIDDK · UNIV OF MARYLAND, COLLEGE PARK · PI ROKITA, STEVEN E · 2009 to 2012
$1.3M
NIDDK NIH HHS DK084186NIDDK NIH HHS R01 DK084186
6 · The paper itself

Abstract

Reductive dehalogenation such as that catalyzed by iodotyrosine deiodinase (IYD) is highly unusual in aerobic organisms but necessary for iodide salvage from iodotyrosine generated during thyroxine biosynthesis. Equally unusual is the dependence of this process on flavin. Rapid kinetics have now been used to define the basic processes involved in IYD catalysis. Time-dependent quenching of flavin fluorescence was used to monitor halotyrosine association to IYD. The substrates chloro-, bromo-, and iodotyrosine bound with similar rate constants (kon) ranging from 1.3 × 10(6) to 1.9 × 10(6) M(-1) s(-1). Only the inert substrate analogue fluorotyrosine exhibited a significantly (5-fold) slower kon (0.3 × 10(6) M(-1) s(-1)). All data fit a standard two-state model and indicated that no intermediate complex accumulated during closure of the active site lid induced by substrate. Subsequent halide elimination does not appear to limit reactions of bromo- and iodotyrosine since both fully oxidized the reduced enzyme with nearly equivalent second-order rate constants (7.3 × 10(3) and 8.6 × 10(3) M(-1) s(-1), respectively) despite the differing strength of their carbon-halogen bonds. In contrast to these substrates, chlorotyrosine reacted with the reduced enzyme approximately 20-fold more slowly and revealed a spectral intermediate that formed at approximately the same rate as the bromo- and iodotyrosine reactions.

Indexed as

BiocatalysisCatalytic DomainDinitrocresolsHumansIodide PeroxidaseKineticsMonoiodotyrosineOxidation-ReductionProtein BindingThyroid Gland4,6-dinitro-o-cresolDinitrocresolsIodide PeroxidaseMonoiodotyrosine

Identifiers

PMID26151430
PMCPMC4938124
OpenAlexW2463079858

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.