Evidence map›Paper›PMID 26150326›Full record

ReviewGenesis (New York, N.Y. : 2000)2015

Mouse Genome Database: From sequence to phenotypes and disease models.

Janan T Eppig, Joel E Richardson, James A Kadin, Cynthia L Smith, Judith A Blake, Carol J Bult, MGD Team

Abstract readReview
In one paragraph

Review in Genesis (New York, N.Y. : 2000), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. GMMID: genetically modified mice information database.Database : the journal of biological databases and curation · 2024
    Article
  4. Article
  5. Article
  6. Wild-derived mice: from genetic diversity to variation in immune responses.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Review
  7. Article
  8. Review
  9. FlyBase at 25: looking to the future.Nucleic acids research · 2017
    Article
  10. RegenBase: a knowledge base of spinal cord injury biology for translational research.Database : the journal of biological databases and curation · 2016
    Article
  11. Cross-organism analysis using InterMine.Genesis (New York, N.Y. : 2000) · 2015
    Review
  12. Mouse Genome Informatics (MGI): reflecting on 25 years.Mammalian genome : official journal of the International Mammalian Genome Society · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Janan T EppigThe Jackson Laboratory, Bar Harbor, Maine.ORCID http://orcid.org/0000-0003-1652-8072
Joel E RichardsonThe Jackson Laboratory, Bar Harbor, Maine.
James A KadinThe Jackson Laboratory, Bar Harbor, Maine.
Cynthia L SmithThe Jackson Laboratory, Bar Harbor, Maine.
Judith A BlakeThe Jackson Laboratory, Bar Harbor, Maine.
Carol J BultThe Jackson Laboratory, Bar Harbor, Maine.
MGD Team

Funding

SOFTWARE AND DATABASE SYSTEM DEVELOPMENTP41HG000330 · NHGRI · JACKSON LABORATORY · PI RICHARDSON, JOEL E. · 1995 to 2010
$72.1M
Mouse Genome DatabaseU41HG000330 · NHGRI · JACKSON LABORATORY · PI BLAKE, JUDITH A, BULT, CAROL J · 2011 to 2020
$45.5M
MULTI-LEVEL ANALYSIS AND DISPLAY OF MOUSE GENOME DATAP01HG000330 · NHGRI · JACKSON LABORATORY · PI EPPIG, JANAN T. · 1990 to 1994
–
NHGRI NIH HHS HG00 0330NHGRI NIH HHS P41 HG000330NHGRI NIH HHS U41 HG000330
6 · The paper itself

Abstract

The Mouse Genome Database (MGD, www.informatics.jax.org) is the international scientific database for genetic, genomic, and biological data on the laboratory mouse to support the research requirements of the biomedical community. To accomplish this goal, MGD provides broad data coverage, serves as the authoritative standard for mouse nomenclature for genes, mutants, and strains, and curates and integrates many types of data from literature and electronic sources. Among the key data sets MGD supports are: the complete catalog of mouse genes and genome features, comparative homology data for mouse and vertebrate genes, the authoritative set of Gene Ontology (GO) annotations for mouse gene functions, a comprehensive catalog of mouse mutations and their phenotypes, and a curated compendium of mouse models of human diseases. Here, we describe the data acquisition process, specifics about MGD's key data areas, methods to access and query MGD data, and outreach and user help facilities.

Indexed as

Databases, GeneticGenomeAnimalsDisease Models, AnimalGenetic Association StudiesGenomicsInternetMiceModels, AnimalSequence Analysis, DNAdatabasegene functiongenomicshuman disease modelsmouse

Identifiers

PMID26150326
PMCPMC4545690

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.