Evidence map›Paper›PMID 26149474›Full record

ArticleScientific reports2015

Transcriptome analysis of the biofilm formed by methicillin-susceptible Staphylococcus aureus.

Xiaojuan Tan, Nan Qin, Chunyan Wu, Jiyang Sheng, Rui Yang, Beiwen Zheng, Zhanshan Ma, Lin Liu, Xinhua Peng, Aiqun Jia

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  7. Detection of biofilm genes in MDROpen veterinary journal · 2025
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  8. Antibiotics (Basel, Switzerland) · 2024
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  11. Analysis of the Presence of the Virulence and Regulation Genes fromInternational journal of environmental research and public health · 2023
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. [Research advances on the formation mechanism and diagnosis of bacteria biofilms in chronic wounds].Zhonghua shao shang za zhi = Zhonghua shaoshang zazhi = Chinese journal of burns · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Xiaojuan TanSchool of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
Nan QinState Key Laboratory for Diagnosis and Treatment of Infectious Disease, the First Affiliated Hospital, Zhejiang University, Hangzhou 310003, China.
Chunyan WuRealbio Genomics Institute, Shanghai 200050, China.
Jiyang ShengSchool of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
Rui YangSchool of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
Beiwen ZhengState Key Laboratory for Diagnosis and Treatment of Infectious Disease, the First Affiliated Hospital, Zhejiang University, Hangzhou 310003, China.
Zhanshan MaKunming Institute of Zoology, Chinese Academy of Science, Kunming 650223, China.
Lin LiuState Key Laboratory for Diagnosis and Treatment of Infectious Disease, the First Affiliated Hospital, Zhejiang University, Hangzhou 310003, China.
Xinhua PengSchool of Chemical Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
Aiqun JiaSchool of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
Nanjing University of Science and Technology · CNZhejiang University · CNKunming Institute of Zoology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilm formation is regarded as one of the major determinants in the prevalence of methicillin-resistant Staphylococcus aureus (MRSA) as pathogens of medical device-related infection. However, methicillin-susceptible S. aureus (MSSA) can also form biofilm in vitro and such biofilms are resistant to vancomycin. Hence, researching the possible mechanisms of MSSA biofilm formation is urgent and necessary. Here, we used S. aureus ATCC25923 as the model strain, and studied gene expression profiles in biofilms after the treatment of ursolic acid and resveratrol using RNA-seq technology. The results showed that only ursolic acid could inhibit biofilm formation, which differed from their applied on the multiple clinical drugs resistant MRSA biofilm. RNA-seq data was validated by examining the expression of six genes involved in biofilm formation by qRT-PCR. These data analysis indicated that the mechanism of the MSSA biofilm formation was different from that of the MRSA, due to absence of accessory gene regulator (agr) function. These findings suggest that biofilms of S. aureus with agr dysfunction may be more resistant than those with agr function. Therefore, the infection from clinical MSSA may be recalcitrant once forming biofilm. Further study is necessary to uncover the mechanisms of biofilm formation in other clinical S. aureus.

Indexed as

Gene Expression ProfilingAnti-Bacterial AgentsBiofilmsMethicillin-Resistant Staphylococcus aureusMicrobial Sensitivity TestsResveratrolRNA, BacterialSequence Analysis, RNAStaphylococcus aureusStilbenesTranscriptomeTriterpenesUrsolic AcidVancomycinAnti-Bacterial AgentsResveratrolRNA, BacterialStilbenesTriterpenesUrsolic AcidVancomycin

Identifiers

PMID26149474
PMCPMC4493712
OpenAlexW876246616

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.