Evidence map›Paper›PMID 26149386›Full record

ArticleMolecular and cellular biology2015

Regulation of Transcription Elongation by the XPG-TFIIH Complex Is Implicated in Cockayne Syndrome.

Takashi Narita, Keiko Narita, Arato Takedachi, Masafumi Saijo, Kiyoji Tanaka

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Takashi NaritaHuman Cell Biology Group, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan tnarita@fbs.osaka-u.ac.jp ktanaka@fbs.osaka-u.ac.jp.
Keiko NaritaHuman Cell Biology Group, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Arato TakedachiHuman Cell Biology Group, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Masafumi SaijoHuman Cell Biology Group, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Kiyoji TanakaHuman Cell Biology Group, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan tnarita@fbs.osaka-u.ac.jp ktanaka@fbs.osaka-u.ac.jp.
Osaka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

XPG is a causative gene underlying the photosensitive disorder xeroderma pigmentosum group G (XP-G) and is involved in nucleotide excision repair. Here, we show that XPG knockdown represses epidermal growth factor (EGF)-induced FOS transcription at the level of transcription elongation with little effect on EGF signal transduction. XPG interacted with transcription elongation factors in concert with TFIIH, suggesting that the XPG-TFIIH complex serves as a transcription elongation factor. The XPG-TFIIH complex was recruited to promoter and coding regions of both EGF-induced (FOS) and housekeeping (EEF1A1) genes. Further, EGF-induced recruitment of RNA polymerase II and TFIIH to FOS was reduced by XPG knockdown. Importantly, EGF-induced FOS transcription was markedly lower in XP-G/Cockayne syndrome (CS) cells expressing truncated XPG than in control cells expressing wild-type (WT) XPG, with less significant decreases in XP-G cells with XPG nuclease domain mutations. In corroboration of this finding, both WT XPG and a missense XPG mutant from an XP-G patient were recruited to FOS upon EGF stimulation, but an XPG mutant mimicking a C-terminal truncation from an XP-G/CS patient was not. These results suggest that the XPG-TFIIH complex is involved in transcription elongation and that defects in this association may partly account for Cockayne syndrome in XP-G/CS patients.

Indexed as

Cell Line, TumorCockayne SyndromeDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA RepairEndonucleasesEpidermal Growth FactorHEK293 CellsHeLa CellsHumansNuclear ProteinsPeptide Elongation Factor 1Promoter Regions, GeneticProto-Oncogene Proteins c-fosRNA Polymerase IISignal TransductionDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EEF1A1 protein, humanEndonucleasesEpidermal Growth FactorNuclear ProteinsPeptide Elongation Factor 1Proto-Oncogene Proteins c-fosRNA Polymerase IITranscription FactorsTranscription Factors, TFIII

Identifiers

PMID26149386
PMCPMC4539375
OpenAlexW2307159153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.