Evidence map›Paper›PMID 26148071›Full record

ArticlePloS one2015

Exploring Genetic Factors Involved in Huntington Disease Age of Onset: E2F2 as a New Potential Modifier Gene.

Leire Valcárcel-Ocete, Gorka Alkorta-Aranburu, Mikel Iriondo, Asier Fullaondo, María García-Barcina, José Manuel Fernández-García, Elena Lezcano-García, José María Losada-Domingo, Javier Ruiz-Ojeda, Amaia Álvarez de Arcaya and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. AnIranian journal of basic medical sciences · 2023
    Article
  3. A Glimpse of Molecular Biomarkers in Huntington's Disease.International journal of molecular sciences · 2022
    Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 10 institutions in 5 countries.

Leire Valcárcel-OceteDepartment of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country (UPV/EHU), Leioa, Spain.
Gorka Alkorta-AranburuDepartment of Human Genetics, University of Chicago, Chicago, United States of America.
Mikel IriondoDepartment of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country (UPV/EHU), Leioa, Spain.
Asier FullaondoDepartment of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country (UPV/EHU), Leioa, Spain.
María García-BarcinaGenetics Unit, Basurto University Hospital, Bilbao, Spain.
José Manuel Fernández-GarcíaNeurology Service, Basurto University Hospital, Bilbao, Spain.
Elena Lezcano-GarcíaDepartment of Neurology, Cruces University Hospital, Barakaldo, Spain.
José María Losada-DomingoDepartment of Neurology, Cruces University Hospital, Barakaldo, Spain.
Javier Ruiz-OjedaDepartment of Neurology, Galdakao-Usansolo Hospital, Galdakao, Spain.
Amaia Álvarez de ArcayaDepartment of Neurology, Alava University Hospital, Txagorritxu, Vitoria-Gasteiz, Spain.
José María Pérez-RamosDepartment of Neurology, Alava University Hospital, Santiago Apóstol, Vitoria-Gasteiz, Spain.
Raymund A C RoosDepartment of Neurology, Leiden University Medical Centre (LUMC), Leiden, The Netherlands.
Jørgen E NielsenDanish Dementia Research Centre, Neurogenetics Clinic, University Hospital of Copenhagen- Rigshospitalet, Copenhagen, Denmark.
Carsten SaftHuntington-Zentrum (NRW) Bochum, St. Josef-Hospital, Bochum, Germany.
REGISTRY investigators of the European Huntington's Disease Network
Ana M ZubiagaDepartment of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country (UPV/EHU), Leioa, Spain.
Ana AguirreDepartment of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country (UPV/EHU), Leioa, Spain.
University of the Basque Country · ESHospital de Basurto · ESHospital de Cruces · ESCopenhagen University Hospital · DKHospital de Galdakao · ESHospital Santiago Apostol · ESHospital Txagorritxu · ESLeiden University Medical Center · NLSt. Josef-Hospital · DEUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age of onset (AO) of Huntington disease (HD) is mainly determined by the length of the CAG repeat expansion (CAGexp) in exon 1 of the HTT gene. Additional genetic variation has been suggested to contribute to AO, although the mechanism by which it could affect AO is presently unknown. The aim of this study is to explore the contribution of candidate genetic factors to HD AO in order to gain insight into the pathogenic mechanisms underlying this disorder. For that purpose, two AO definitions were used: the earliest age with unequivocal signs of HD (earliest AO or eAO), and the first motor symptoms age (motor AO or mAO). Multiple linear regression analyses were performed between genetic variation within 20 candidate genes and eAO or mAO, using DNA and clinical information of 253 HD patients from REGISTRY project. Gene expression analyses were carried out by RT-qPCR with an independent sample of 35 HD patients from Basque Country Hospitals. We found suggestive association signals between HD eAO and/or mAO and genetic variation within the E2F2, ATF7IP, GRIN2A, GRIN2B, LINC01559, HIP1 and GRIK2 genes. Among them, the most significant was the association between eAO and rs2742976, mapping to the promoter region of E2F2 transcription factor. Furthermore, rs2742976 T allele patient carriers exhibited significantly lower lymphocyte E2F2 gene expression, suggesting a possible implication of E2F2-dependent transcriptional activity in HD pathogenesis. Thus, E2F2 emerges as a new potential HD AO modifier factor.

Indexed as

AdultAgedAge of OnsetAllelesExonsFemaleGenes, ModifierGenotypeHumansHuntington DiseaseMaleMiddle AgedPolymorphism, Single NucleotideTrinucleotide RepeatsYoung Adult

Identifiers

PMID26148071
PMCPMC4493078
OpenAlexW1515435818

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.