Evidence map›Paper›PMID 26148048›Full record

ArticleNature structural & molecular biology2015

Recognition of microbial glycans by human intelectin-1.

Darryl A Wesener, Kittikhun Wangkanont, Ryan McBride, Xuezheng Song, Matthew B Kraft, Heather L Hodges, Lucas C Zarling, Rebecca A Splain, David F Smith, Richard D Cummings and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 1 pooled it
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 1 synthesis or guideline pooled it, 172 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. The role of omentin-1 in female reproduction: a critical review.The Journal of reproduction and development · 2026
    Review
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  7. ApoE3 Christchurch and tau interaction as a protective mechanism against Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
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  9. Article
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  11. Soluble Human Lectins at the Host-Microbe Interface.Annual review of biochemistry · 2024
    Review
  12. Chemical biology tools to probe bacterial glycans.Current opinion in chemical biology · 2024
    Review
  13. Article
  14. GalInternational journal of molecular sciences · 2024
    Article
  15. Article
  16. Article
  17. Review
  18. APOE Christchurch-mimetic therapeutic antibody reduces APOE-mediated toxicity and tau phosphorylation.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
  19. Mass Spectrometry Analysis of Shark Skin Proteins.International journal of molecular sciences · 2023
    Review
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Darryl A WesenerDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kittikhun WangkanontDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000000271902955
Ryan McBride1] Department of Cell and Molecular Biology, Scripps Research Institute, La Jolla, California, USA. [2] Department of Chemical Physiology, Scripps Research Institute, La Jolla, California, USA.
Xuezheng Song1] Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA. [2] Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Matthew B KraftDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Heather L HodgesDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Lucas C ZarlingDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Rebecca A SplainDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
David F Smith1] Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA. [2] Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Richard D Cummings1] Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA. [2] Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
James C Paulson1] Department of Cell and Molecular Biology, Scripps Research Institute, La Jolla, California, USA. [2] Department of Chemical Physiology, Scripps Research Institute, La Jolla, California, USA.
Katrina T ForestDepartment of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Laura L Kiessling1] Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA. [2] Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
University of Wisconsin–Madison · USEmory University · USScripps Research Institute · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
Chemistry-Biology Interface Training ProgramT32GM008505 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 1993 to 2023
$9.8M
Synthetic Ligands for Modulating Immune Cell ResponsesR01AI055258 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KIESSLING, LAURA L · 2003 to 2024
$7.8M
Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
MULTIVALENT PROTEIN CARBOHYDRATE INTERACTIONSR01GM055984 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KIESSLING, LAURA L · 1997 to 2014
$3.9M
The Chemistry and Biology of Galactofuranose ResiduesR01AI063596 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KIESSLING, LAURA L · 2005 to 2014
$3.0M
Protein-Glycan Interaction Resource of the CFGR24GM098791 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, PAULSON, JAMES C · 2011 to 2013
$2.6M
Acquisition of a New Confocal Microscope to Replace an Obsolete InstrumentS10RR024715 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI KALIL, RONALD E · 2009 to 2009
$359k
NMR SPECTROMETERS10RR008389 · NCRR · UNIVERSITY OF WISCONSIN MADISON · PI VEDEJS, EDWIN · 1993 to 1993
–
ACQUISITION OF MASS SPECTROMETER FOR CORE FACILITYS10RR013790 · NCRR · UNIVERSITY OF WISCONSIN MADISON · PI RAINES, RONALD T · 1999 to 1999
–
NCI NIH HHS P30 CA014520NCRR NIH HHS 1S10RR024715NCRR NIH HHS S10 RR008389NCRR NIH HHS S10 RR013790NCRR NIH HHS S10 RR024715NCRR NIH HHS S10 RR13790NIAID NIH HHS R01 AI055258NIAID NIH HHS R01 AI063596NIAID NIH HHS R01AI063596NIGMS NIH HHS GM062116NIGMS NIH HHS GM98791NIGMS NIH HHS P41 GM103694NIGMS NIH HHS R01 GM055984NIGMS NIH HHS R01GM55984NIGMS NIH HHS R24 GM098791NIGMS NIH HHS T32 GM008505NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

The glycans displayed on mammalian cells can differ markedly from those on microbes. Such differences could, in principle, be 'read' by carbohydrate-binding proteins, or lectins. We used glycan microarrays to show that human intelectin-1 (hIntL-1) does not bind known human glycan epitopes but does interact with multiple glycan epitopes found exclusively on microbes: β-linked D-galactofuranose (β-Galf), D-phosphoglycerol-modified glycans, heptoses, D-glycero-D-talo-oct-2-ulosonic acid (KO) and 3-deoxy-D-manno-oct-2-ulosonic acid (KDO). The 1.6-Å-resolution crystal structure of hIntL-1 complexed with β-Galf revealed that hIntL-1 uses a bound calcium ion to coordinate terminal exocyclic 1,2-diols. N-acetylneuraminic acid (Neu5Ac), a sialic acid widespread in human glycans, has an exocyclic 1,2-diol but does not bind hIntL-1, probably owing to unfavorable steric and electronic effects. hIntL-1 marks only Streptococcus pneumoniae serotypes that display surface glycans with terminal 1,2-diol groups. This ligand selectivity suggests that hIntL-1 functions in microbial surveillance.

Indexed as

Amino Acid SequenceAnimalsCarbohydrate SequenceCrystallography, X-RayCytokinesEpitopesGPI-Linked ProteinsHEK293 CellsHumansLectinsLigandsLipopolysaccharidesMiceModels, ChemicalModels, MolecularMolecular Sequence DataCytokinesEpitopesGPI-Linked ProteinsITLN1 protein, humanLectinsLigandsLipopolysaccharidesMonosaccharidesPolysaccharides

Identifiers

PMID26148048
PMCPMC4526365
OpenAlexW2202888892

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.