Evidence map›Paper›PMID 26147989›Full record

ArticlePloS one2015

The NOD2 Single Nucleotide Polymorphism rs72796353 (IVS4+10 A>C) Is a Predictor for Perianal Fistulas in Patients with Crohn's Disease in the Absence of Other NOD2 Mutations.

Fabian Schnitzler, Matthias Friedrich, Christiane Wolf, Johannes Stallhofer, Marianne Angelberger, Julia Diegelmann, Torsten Olszak, Cornelia Tillack, Florian Beigel, Burkhard Göke and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 3 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 3 syntheses or guidelines pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Review
  7. Review
  8. Clinical and magnetic resonance imaging spectrum of complex perianal fistulizing Crohn's disease: A cohort study from northern India.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2023
    Article
  9. Review
  10. Review
  11. Article
  12. Genetic association analysis ofWorld journal of gastroenterology · 2020
    Observational
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Fabian SchnitzlerDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Matthias FriedrichDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany; Department of Preventive Dentistry and Periodontology, LMU, Munich, Germany.
Christiane WolfMax-Planck-Institute of Psychiatry, Biostatistics Group, Munich, Germany.
Johannes StallhoferDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Marianne AngelbergerDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Julia DiegelmannDepartment of Preventive Dentistry and Periodontology, LMU, Munich, Germany.
Torsten OlszakDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Cornelia TillackDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Florian BeigelDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Burkhard GökeDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Jürgen GlasDepartment of Human Genetics, Rheinisch-Westfälische Technische Hochschule (RWTH) Aachen, Germany.
Peter LohseDepartment of Clinical Chemistry-Grosshadern, LMU, Munich, Germany.
Stephan BrandDepartment of Medicine II-Grosshadern, Ludwig-Maximilians-University (LMU), Munich, Germany.
Ludwig-Maximilians-Universität München · DEMax Planck Institute of Psychiatry · DERWTH Aachen University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA previous study suggested an association of the single nucleotide polymorphism (SNP) rs72796353 (IVS4+10 A>C) in the NOD2 gene with susceptibility to Crohn's disease (CD). However, this finding has not been confirmed. Given that NOD2 variants still represent the most important predictors for CD susceptibility and phenotype, we evaluated the association of rs72796353 with inflammatory bowel disease (IBD) susceptibility and the IBD phenotype. METHODOLOGY: Genomic DNA from 2256 Caucasians, including 1073 CD patients, 464 patients with ulcerative colitis (UC), and 719 healthy controls, was genotyped for the NOD2 SNP rs72796353 and the three main CD-associated NOD2 mutations rs2066844, rs2066845, and rs2066847. Subsequently, IBD association and genotype-phenotype analyses were conducted.

resultsIn contrast to the strong associations of the NOD2 SNPs rs2066844 (p=3.51 x 10(-3)), rs2066845 (p=1.54 x 10(-2)), and rs2066847 (p=1.61 x 10(-20)) with CD susceptibility, no significant association of rs72796353 with CD or UC susceptibility was found. However, in CD patients without the three main CD-associated NOD2 mutations, rs72796353 was significantly associated with the development of perianal fistulas (p=2.78 x 10(-7), OR 5.27, [95% CI 2.75-10.12] vs. NOD2 wild-type carriers). CONCLUSION/SIGNIFICANCE: Currently, this study represents the largest genotype-phenotype analysis of the impact of the NOD2 variant rs72796353 on the disease phenotype in IBD. Our data demonstrate that in CD patients the IVS4+10 A>C variant is strongly associated with the development of perianal fistulas. This association is particularly pronounced in patients who are not carriers of the three main CD-associated NOD2 mutations, suggesting rs72796353 as additional genetic marker for the CD disease behaviour.

Indexed as

Genetic Predisposition to DiseaseMutationPolymorphism, Single NucleotideAdultCase-Control StudiesCrohn DiseaseFemaleHumansMaleMiddle AgedNod2 Signaling Adaptor ProteinRectal FistulaNOD2 protein, humanNod2 Signaling Adaptor Protein

Identifiers

PMID26147989
PMCPMC4493062
OpenAlexW1961145593

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.