Evidence map›Paper›PMID 26147570›Full record

ArticlePloS one2015

A Century of Shope Papillomavirus in Museum Rabbit Specimens.

Clara Escudero Duch, Richard A J Williams, Robert M Timm, Javier Perez-Tris, Laura Benitez

Open access · goldAbstract readComparative StudyHistorical Article
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
  3. The rabbit papillomavirus model: a valuable tool to study viral-host interactions.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Clara Escudero DuchDepartment of Microbiology III, Faculty of Biological Sciences, Universidad Complutense de Madrid, Madrid, Spain.
Richard A J WilliamsDepartment of Zoology and Physical Anthropology, Faculty of Biological Sciences, Universidad Complutense de Madrid, Madrid, Spain; Natural Sciences, Saint Louis University, Madrid, Spain; Department of Ecology and Evolutionary Biology & Natural History Museum, University of Kansas, Lawrence, Kansas 66045, United States of America.
Robert M TimmDepartment of Ecology and Evolutionary Biology & Natural History Museum, University of Kansas, Lawrence, Kansas 66045, United States of America.
Javier Perez-TrisDepartment of Zoology and Physical Anthropology, Faculty of Biological Sciences, Universidad Complutense de Madrid, Madrid, Spain.
Laura BenitezDepartment of Microbiology III, Faculty of Biological Sciences, Universidad Complutense de Madrid, Madrid, Spain.
Universidad Complutense de Madrid · ESSaint Louis University · ESUniversity of Kansas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sylvilagus floridanus Papillomavirus (SfPV) causes growth of large horn-like tumors on rabbits. SfPV was described in cottontail rabbits (probably Sylvilagus floridanus) from Kansas and Iowa by Richard Shope in 1933, and detected in S. audubonii in 2011. It is known almost exclusively from the US Midwest. We explored the University of Kansas Natural History Museum for historical museum specimens infected with SfPV, using molecular techniques, to assess if additional wild species host SfPV, and whether SfPV occurs throughout the host range, or just in the Midwest. Secondary aims were to detect distinct strains, and evidence for strain spatio-temporal specificity. We found 20 of 1395 rabbits in the KU collection SfPV symptomatic. Three of 17 lagomorph species (S. nuttallii, and the two known hosts) were symptomatic, while Brachylagus, Lepus and eight additional Sylvilagus species were not. 13 symptomatic individuals were positive by molecular testing, including the first S. nuttallii detection. Prevalence of symptomatic individuals was significantly higher in Sylvilagus (1.8%) than Lepus. Half of these specimens came from Kansas, though new molecular detections were obtained from Jalisco-Mexico's first-and Nebraska, Nevada, New Mexico, and Texas, USA. We document the oldest lab-confirmed case (Kansas, 1915), pre-dating Shope's first case. SfPV amplification was possible from 63.2% of symptomatic museum specimens. Using multiple methodologies, rolling circle amplification and, multiple isothermal displacement amplification in addition to PCR, greatly improved detection rates. Short sequences were obtained from six individuals for two genes. L1 gene sequences were identical to all previously detected sequences; E7 gene sequences, were more variable, yielding five distinct SfPV1 strains that differing by less than 2% from strains circulating in the Midwest and Mexico, between 1915 and 2005. Our results do not clarify whether strains are host species specific, though they are consistent with SfPV specificity to genus Sylvilagus.

Indexed as

AnimalsAntigens, ViralBase SequenceColoradoCottontail rabbit papillomavirusDNA, ViralGenes, ViralHistory, 20th CenturyHistory, 21st CenturyHost SpecificityKansasMexicoMidwestern United StatesMolecular Sequence DataMuseumsOncogene Proteins, ViralAntigens, ViralDNA, ViralE7 protein, cottontail rabbit papillomavirusL1 protein, cottontail rabbit papillomavirusOncogene Proteins, ViralViral Structural Proteins

Identifiers

PMID26147570
PMCPMC4493010
OpenAlexW2163455060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.