Evidence map›Paper›PMID 26147429›Full record

ArticleInternational journal of molecular sciences2015

Identification and Characterization of 40 Isolated Rehmannia glutinosa MYB Family Genes and Their Expression Profiles in Response to Shading and Continuous Cropping.

Fengqing Wang, Yanfei Suo, He Wei, Mingjie Li, Caixia Xie, Lina Wang, Xinjian Chen, Zhongyi Zhang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Fengqing WangCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China. heauzycxw@126.com.
Yanfei SuoCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China. suoyanfei1990@163.com.
He WeiInstitute of Industrial Crops, Henan Academy of Agricultural Science, Zhengzhou 450002, China. weihezj123@126.com.
Mingjie LiCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. xinyuzszj@163.com.
Caixia XieSchool of medicine, Henan University of Traditional Chinese Medicine, Zhengzhou 450046, China. nanyangxcx@126.com.
Lina WangSchool of medicine, Henan University of Traditional Chinese Medicine, Zhengzhou 450046, China. lnsdhz2012@126.com.
Xinjian ChenCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China. chenxinjian3978@126.com.
Zhongyi ZhangCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China. zyzhang@fafu.edu.cn.
Henan Agricultural University · CNFujian Agriculture and Forestry University · CNHenan University of Traditional Chinese Medicine · CNHenan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The v-myb avian myeloblastosis viral oncogene homolog (MYB) superfamily constitutes one of the most abundant groups of transcription factors (TFs) described in plants. To date, little is known about the MYB genes in Rehmannia glutinosa. Forty unique MYB genes with full-length cDNA sequences were isolated. These 40 genes were grouped into five categories, one R1R2R3-MYB, four TRFL MYBs, four SMH MYBs, 25 R2R3-MYBs, and six MYB-related members. The MYB DNA-binding domain (DBD) sequence composition was conserved among proteins of the same subgroup. As expected, most of the closely related members in the phylogenetic tree exhibited common motifs. Additionally, the gene structure and motifs of the R. glutinosa MYB genes were analyzed. MYB gene expression was analyzed in the leaf and the tuberous root under two abiotic stress conditions. Expression profiles showed that most R. glutinosa MYB genes were expressed in the leaf and the tuberous root, suggesting that MYB genes are involved in various physiological and developmental processes in R. glutinosa. Seven MYB genes were up-regulated in response to shading in at least one tissue. Two MYB genes showed increased expression and 13 MYB genes showed decreased expression in the tuberous root under continuous cropping. This investigation is the first comprehensive study of the MYB gene family in R. glutinosa.

Indexed as

ForestsMultigene FamilySunlightAmino Acid SequenceBase SequenceForestryGene Expression Regulation, PlantMolecular Sequence DataPlant ProteinsProtein Structure, TertiaryRehmanniaTranscription FactorsPlant ProteinsTranscription Factorscontinuous croppingMYB transcription factorRehmannia glutinosashading

Identifiers

PMID26147429
PMCPMC4519885
OpenAlexW1500578285

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.