Evidence map›Paper›PMID 26143186›Full record

ArticleJournal of translational medicine2015

Characteristics of A20 gene polymorphisms and clinical significance in patients with rheumatoid arthritis.

Lihua Zhu, Liang Wang, Xu Wang, Lingling Zhou, Ziwei Liao, Ling Xu, Huixia Wu, Jie Ren, Zhaoxia Li, Lijian Yang and 5 more

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. International journal of general medicine · 2024
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  10. Repressive Control of Keratinocyte Cytoplasmic Inflammatory Signaling.International journal of molecular sciences · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. A20: a master regulator of arthritis.Arthritis research & therapy · 2020
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Lihua ZhuDepartment of Rheumatism and Immunology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. 125741799@qq.com.
Liang WangDepartment of Oncology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. 15857266@qq.com.
Xu WangInstitute of Hematology, Jinan University, Guangzhou, 510632, China. 742630368@qq.com.
Lingling ZhouInstitute of Hematology, Jinan University, Guangzhou, 510632, China. 251582936@qq.com.
Ziwei LiaoInstitute of Hematology, Jinan University, Guangzhou, 510632, China. lzw122623@aliyun.com.
Ling XuInstitute of Hematology, Jinan University, Guangzhou, 510632, China. lingxu114@163.com.
Huixia WuDepartment of Rheumatism and Immunology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. 56085299@qq.com.
Jie RenDepartment of Rheumatism and Immunology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. 41607951@qq.com.
Zhaoxia LiDepartment of Rheumatism and Immunology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. 547932486@qq.com.
Lijian YangInstitute of Hematology, Jinan University, Guangzhou, 510632, China. jnyanglijian@163.com.
Shaohua ChenInstitute of Hematology, Jinan University, Guangzhou, 510632, China. jnshaohuachen@163.com.
Bo LiInstitute of Hematology, Jinan University, Guangzhou, 510632, China. jnlibo517@163.com.
Xiuli WuInstitute of Hematology, Jinan University, Guangzhou, 510632, China. siulier@163.com.
Yi ZhouDepartment of Rheumatism and Immunology, First Affiliated Hospital, Jinan University, Guangzhou, 510632, China. zhou21yi@163.com.
Yangqiu LiInstitute of Hematology, Jinan University, Guangzhou, 510632, China. yangqiuli@hotmail.com.
Jinan University · CNFirst Affiliated Hospital of Jinan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThere are a number of studies regarding to the susceptibility of A20 SNPs in rheumatoid arthritis (RA); however, a few of these studies have shown an association between polymorphisms in the A20 gene and RA risk in the Chinese population. The aim of this study was to investigate the characteristics of A20 gene polymorphisms, the association between polymorphisms and clinical significance in Chinese RA patients.

methodsPCR and sequencing were used to identify A20 gene polymorphisms in peripheral blood mononuclear cells (PBMCs) (50 cases), synovial fluid (11 cases) from RA patients and PBMCs from 30 healthy individuals. Quantitative Real-time PCR (qRT-PCR) was used to analyze the A20 mRNA expression in 38 RA patients and 40 healthy individuals. Pearson's Chi square test and two independent-samples Wilcoxon tests were used for statistical analysis.

resultsEight single nucleotide polymorphisms (SNPs) (rs5029937, rs3799491, rs598493, rs2307859, rs146534657, rs2230926, rs661561, and rs582757) were identified in PBMCs of RA patients. One new mutation (14284 T > A) was identified in synovial fluid mononuclear cells from one RA case. rs146534657 was identified for the first time in two RA cases. Patients with rs146534657 (12411 A > G, Asn102Ser) AG genotype or rs2230926 (12486 T > G, Phe127Cys) TG genotype had poor outcome. Significantly lower A20 mRNA expression was found in PBMCs from RA patients compared with healthy individuals (p < 0.001). There was a higher A20 mRNA expression in RA patients with rs2230926 TG genotype and rs146534657 AG genotype (11.56 ± 7.39) than patients with rs2230926 TT genotype and rs146534657 AA genotype (5.63 ± 4.37) (p = 0.031).

conclusionSignificantly lower A20 expression was found in RA patients. The polymorphisms of A20 were characterized in RA patients. We detected rs146534657 for the first time and identified a new A20 mutation (14284 T > A). A20 rs2230926 TG genotype and rs146534657 AG genotype may be related to poor outcome in RA patients.

Indexed as

Genetic Predisposition to DiseaseAdolescentAdultAgedAllelesArthritis, RheumatoidBase SequenceCase-Control StudiesDNA-Binding ProteinsDNA Mutational AnalysisFemaleGene Expression RegulationGene FrequencyGenetic LociHumansIntracellular Signaling Peptides and ProteinsDNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsNuclear ProteinsTNFAIP3 protein, humanTumor Necrosis Factor alpha-Induced Protein 3

Identifiers

PMID26143186
PMCPMC4491428
OpenAlexW1908857041

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.