Evidence map›Paper›PMID 26142323›Full record

ArticleBlood cells, molecules & diseases2015

Exome sequencing for molecular characterization of non-HFE hereditary hemochromatosis.

Colin P Farrell, Charles J Parker, John D Phillips

Abstract readCase Reports
In one paragraph

Article in Blood cells, molecules & diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Colin P FarrellUniversity of Utah School of Medicine, Hematology Division, 30North 1900 East, Salt Lake City, UT 84132, United States.
Charles J ParkerUniversity of Utah School of Medicine, Hematology Division, 30North 1900 East, Salt Lake City, UT 84132, United States.
John D PhillipsUniversity of Utah School of Medicine, Hematology Division, 30North 1900 East, Salt Lake City, UT 84132, United States. Electronic address: john.phillips@hsc.utah.edu.
University of Utah · US

Funding

Porphyrias Consortium: SupplementU54DK083909 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BALWANI, MANISHA, DESNICK, ROBERT J · 2009 to 2023
$18.5M
PORPHYRIN BIOSYNTHESIS IN NORMAL AND DISEASE STATESR01DK020503 · NIDDK · UNIVERSITY OF UTAH · PI PARKER, CHARLES J, PHILLIPS, JOHN DEARBORN · 1986 to 2012
$3.3M
Genetic Modifiers of Iron Status in Hemochromatosis HFE C282Y HomozygotesR24DK099846 · NIDDK · UNIVERSITY OF CALIFORNIA-IRVINE · PI ADAMS, PAUL CLIFFORD, BARTON, JAMES C · 2014 to 2016
$2.0M
Regulation of Iron HomeostasisR01DK090257 · NIDDK · UNIVERSITY OF UTAH · PI PHILLIPS, JOHN DEARBORN · 2010 to 2014
$1.8M
Genetic Modifiers of Iron Status in Hemochromatosis HFE C282Y HomozygotesR24DK093433 · NIDDK · UNIVERSITY OF CALIFORNIA-IRVINE · PI MCLAREN, CHRISTINE E., MCLAREN, GORDON D · 2011 to 2011
$376k
NIDDK NIH HHS 5R01DK020503NIDDK NIH HHS R01 DK020503NIDDK NIH HHS R01 DK090257NIDDK NIH HHS R24 DK093433NIDDK NIH HHS R24 DK099846NIDDK NIH HHS U54 DK083909PHS HHS NIDDK 5RO1DK090257
6 · The paper itself

Abstract

Diagnostic genetic testing for hereditary hemochromatosis is readily available for clinically relevant HFE variants (i.e., those that generate the C282Y, H63D and S65C HFE polymorphisms); however, genetic testing for other known causes of iron overload, including mutations affecting genes encoding hemojuvelin, transferrin receptor 2, HAMP, and ferroportin is not. As an alternative to conventional genetic testing we propose diagnostic use of whole exome sequencing for characterization of non-HFE hemochromatosis. To illustrate the effectiveness of whole exome sequencing as a diagnostic tool, we present the case of an 18-year-old female with a probable case of juvenile hemochromatosis, who was referred for specialty care after testing negative for commonly occurring HFE variants. Whole exome sequencing offered complete coverage of target genes and is a fast, cost effective diagnostic tool for characterization of non-HFE hemochromatosis.

Indexed as

ExomeHigh-Throughput Nucleotide SequencingAdolescentFemaleHemochromatosisHumansHemochromatosisHemojuvelinHepcidinIron overloadTransferrin receptor 2

Identifiers

PMID26142323
PMCPMC4491409
OpenAlexW2034417789

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.