Evidence map›Paper›PMID 26138065›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2015

Genome-Wide Association Studies for Taxane-Induced Peripheral Neuropathy in ECOG-5103 and ECOG-1199.

Bryan P Schneider, Lang Li, Milan Radovich, Fei Shen, Kathy D Miller, David A Flockhart, Guanglong Jiang, Gail Vance, Laura Gardner, Matteo Vatta and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 4 pooled it
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 4 syntheses or guidelines pooled it, 142 citations in OpenAlex.

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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Bryan P Schneider *Indiana University School of Medicine, Indianapolis, Indiana.
Lang Li *Indiana University School of Medicine, Indianapolis, Indiana.
Milan Radovich *Indiana University School of Medicine, Indianapolis, Indiana.
Fei ShenIndiana University School of Medicine, Indianapolis, Indiana.
Kathy D MillerIndiana University School of Medicine, Indianapolis, Indiana.
David A FlockhartIndiana University School of Medicine, Indianapolis, Indiana.
Guanglong JiangIndiana University School of Medicine, Indianapolis, Indiana.
Gail VanceIndiana University School of Medicine, Indianapolis, Indiana.
Laura GardnerIndiana University School of Medicine, Indianapolis, Indiana.
Matteo VattaIndiana University School of Medicine, Indianapolis, Indiana.
Shaochun BaiIndiana University School of Medicine, Indianapolis, Indiana.
Dongbing LaiIndiana University School of Medicine, Indianapolis, Indiana.
Daniel KollerIndiana University School of Medicine, Indianapolis, Indiana.
Fengmin ZhaoDana Farber Cancer Institute, Boston, Massachusetts.
Anne O'NeillDana Farber Cancer Institute, Boston, Massachusetts.
Mary Lou SmithResearch Advocacy Network, Plano, Texas.
Elda RaileyResearch Advocacy Network, Plano, Texas.
Carol WhiteCB White, Chicago, Illinois.
Ann PartridgeDana Farber Cancer Institute, Boston, Massachusetts.
Joseph SparanoAlbert Einstein university, Montefiore Medical Center, Bronx, New York.
Nancy E DavidsonUniversity of Pittsburgh Cancer Center, Pittsburgh, Pennsylvania.
Tatiana Foroud *Indiana University School of Medicine, Indianapolis, Indiana.
George W Sledge *Stanford University Medical Center, Stanford, California.
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · USDana-Farber Cancer Institute · US

Funding

ECOG-ACRIN NCORP Research Base - TMISTUG1CA189828 · NCI · ECOG-ACRIN MEDICAL RESEARCH FOUNDATION · PI Peter J ODwyer, MITCHELL D. SCHNALL · 2014 to 2026
$199.7M
Project-006U10CA180820 · NCI · ECOG-ACRIN MEDICAL RESEARCH FOUNDATION · PI Peter J ODwyer · 2014 to 2026
$167.6M
SWOG - Foreign Accrual under UMiU10CA032102 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BLANKE, CHARLES D. · 1985 to 2013
$141.3M
ECOG OPERATIONS OFFICE (IBCSG)U10CA021115 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI COMIS, ROBERT L · 1985 to 2013
$132.6M
PRIMARY CANCER THERAPY GROUP--NSABP (HEADQUARTERS)U10CA012027 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WOLMARK, NORMAN · 1985 to 2012
$117.2M
WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
Statistics CoreU10CA180794 · NCI · DANA-FARBER CANCER INST · PI PAUL J CATALANO, CONSTANTINE A. GATSONIS · 2014 to 2026
$111.2M
TRANSLATIONAL RESEARCHU10CA025224 · NCI · MAYO CLINIC ROCHESTER · PI BUCKNER, JAN C · 1985 to 2013
$85.0M
ECOG-ACRIN Biospecimen Bank to Support NCTNU24CA196172 · NCI · ECOG-ACRIN MEDICAL RESEARCH FOUNDATION · PI STANLEY R. HAMILTON, Scott D Jewell · 2015 to 2026
$41.1M
ECOG Statistical Office Data Management GrantU10CA066636 · NCI · FRONTIER SCI &TECHNOLOGY RSCH FDN, INC · PI GRAY, ROBERT J · 1994 to 2013
$39.5M
PROVIDE STATISTICAL SERVICESU10CA023318 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, ROBERT J · 1985 to 2013
$33.4M
Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
NCATS NIH HHS UL1 TR001108NCI NIH HHS CA12027NCI NIH HHS CA14958NCI NIH HHS CA16116NCI NIH HHS CA20319NCI NIH HHS CA21115NCI NIH HHS CA23318NCI NIH HHS CA25224NCI NIH HHS CA39229NCI NIH HHS CA49883NCI NIH HHS CA66636NCI NIH HHS CA77202NCI NIH HHS N01 CA032102NCI NIH HHS P30 CA013330NCI NIH HHS P50 CA121973NCI NIH HHS U10 CA012027NCI NIH HHS U10 CA014958NCI NIH HHS U10 CA016116NCI NIH HHS U10 CA020319NCI NIH HHS U10 CA021115NCI NIH HHS U10 CA023318NCI NIH HHS U10 CA025224NCI NIH HHS U10 CA032102NCI NIH HHS U10 CA039229NCI NIH HHS U10 CA049883NCI NIH HHS U10 CA066636NCI NIH HHS U10 CA077202NCI NIH HHS U10 CA180794NCI NIH HHS U10 CA180795NCI NIH HHS U10 CA180816NCI NIH HHS U10 CA180820NCI NIH HHS U10 CA180844NCI NIH HHS U24 CA196172NCI NIH HHS UG1 CA189828NCI NIH HHS UG1 CA189859NCI NIH HHS UG1 CA233184
6 · The paper itself

Abstract

purposeTaxane-induced peripheral neuropathy (TIPN) is an important survivorship issue for many cancer patients. Currently, there are no clinically implemented biomarkers to predict which patients might be at increased risk for TIPN. We present a comprehensive approach to identification of genetic variants to predict TIPN. EXPERIMENTAL

designWe performed a genome-wide association study (GWAS) in 3,431 patients from the phase III adjuvant breast cancer trial, ECOG-5103 to compare genotypes with TIPN. We performed candidate validation of top SNPs for TIPN in another phase III adjuvant breast cancer trial, ECOG-1199.

resultsWhen evaluating for grade 3-4 TIPN, 120 SNPs had a P value of <10(-4) from patients of European descent (EA) in ECOG-5103. Thirty candidate SNPs were subsequently tested in ECOG-1199 and SNP rs3125923 was found to be significantly associated with grade 3-4 TIPN (P = 1.7 × 10(-3); OR, 1.8). Race was also a major predictor of TIPN, with patients of African descent (AA) experiencing increased risk of grade 2-4 TIPN (HR, 2.1; P = 5.6 × 10(-16)) and grade 3-4 TIPN (HR, 2.6; P = 1.1 × 10(-11)) compared with others. An SNP in FCAMR, rs1856746, had a trend toward an association with grade 2-4 TIPN in AA patients from the GWAS in ECOG-5103 (OR, 5.5; P = 1.6 × 10(-7)).

conclusionsrs3125923 represents a validated SNP to predict grade 3-4 TIPN. Genetically determined AA race represents the most significant predictor of TIPN.

Indexed as

Black PeopleBreast NeoplasmsBridged-Ring CompoundsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansPeripheral Nervous System DiseasesPolymorphism, Single NucleotideReceptors, FcTaxoidsWhite PeopleBridged-Ring CompoundsFcalpha-mu receptor, humanReceptors, FctaxaneTaxoids

Identifiers

PMID26138065
PMCPMC4717479
OpenAlexW2122433511

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.