Evidence map›Paper›PMID 26136754›Full record

ArticleFrontiers in plant science2015

Conservation of AtTZF1, AtTZF2, and AtTZF3 homolog gene regulation by salt stress in evolutionarily distant plant species.

Fabio D'Orso, Anna M De Leonardis, Sergio Salvi, Agata Gadaleta, Ida Ruberti, Luigi Cattivelli, Giorgio Morelli, Anna M Mastrangelo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. The Roles of CCCH Zinc-Finger Proteins in Plant Abiotic Stress Tolerance.International journal of molecular sciences · 2021
    Review
  6. Article
  7. Article
  8. The expression of a candidate cucumber fruit sugar starvation marker genePhysiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Fabio D'OrsoFood and Nutrition Research Centre, Council for Agricultural Research and Economics Rome, Italy.
Anna M De LeonardisCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy ; Department of the Sciences of Agriculture, Food and Environment, University of Foggia Foggia, Italy.
Sergio SalviFood and Nutrition Research Centre, Council for Agricultural Research and Economics Rome, Italy.
Agata GadaletaDepartment of Soil, Plant and Food Sciences, "Aldo Moro" University of Bari Bari, Italy.
Ida RubertiInstitute of Molecular Biology and Pathology, National Research Council Rome, Italy.
Luigi CattivelliCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy ; Genomics Research Centre, Council for Agricultural Research and Economics Fiorenzuola d'Arda, Italy.
Giorgio MorelliFood and Nutrition Research Centre, Council for Agricultural Research and Economics Rome, Italy.
Anna M MastrangeloCereal Research Centre, Council for Agricultural Research and Economics Foggia, Italy.
Cereal Research Centre · ITInstitute of Molecular Biology and Pathology · ITUniversity of Bari Aldo Moro · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arginine-rich tandem zinc-finger proteins (RR-TZF) participate in a wide range of plant developmental processes and adaptive responses to abiotic stress, such as cold, salt, and drought. This study investigates the conservation of the genes AtTZF1-5 at the level of their sequences and expression across plant species. The genomic sequences of the two RR-TZF genes TdTZF1-A and TdTZF1-B were isolated in durum wheat and assigned to chromosomes 3A and 3B, respectively. Sequence comparisons revealed that they encode proteins that are highly homologous to AtTZF1, AtTZF2, and AtTZF3. The expression profiles of these RR-TZF durum wheat and Arabidopsis proteins support a common function in the regulation of seed germination and responses to abiotic stress. In particular, analysis of plants with attenuated and overexpressed AtTZF3 indicate that AtTZF3 is a negative regulator of seed germination under conditions of salt stress. Finally, comparative sequence analyses establish that the RR-TZF genes are encoded by lower plants, including the bryophyte Physcomitrella patens and the alga Chlamydomonas reinhardtii. The regulation of the Physcomitrella AtTZF1-2-3-like genes by salt stress strongly suggests that a subgroup of the RR-TZF proteins has a function that has been conserved throughout evolution.

Indexed as

abiotic stressArabidopsisCCCH zinc finger proteinsdurum wheatgerminationphylogenetic analysisPhyscomitrella patensRR-TZF

Identifiers

PMID26136754
PMCPMC4468379
OpenAlexW3152245812

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.