Evidence map›Paper›PMID 26135134›Full record

ArticlePloS one2015

Insights into the Functional Roles of N-Terminal and C-Terminal Domains of Helicobacter pylori DprA.

Gajendradhar R Dwivedi, Kolluru D Srikanth, Praveen Anand, Javed Naikoo, N S Srilatha, Desirazu N Rao

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. DprA recruits ComM to facilitate recombination during natural transformation in Gram-negative bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Natural Transformation inFrontiers in microbiology · 2020
    Article
  4. Article
  5. RecA Regulation by RecU and DprA DuringFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gajendradhar R DwivediDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Kolluru D SrikanthDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Praveen AnandDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Javed NaikooDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
N S SrilathaDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Desirazu N RaoDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA processing protein A (DprA) plays a crucial role in the process of natural transformation. This is accomplished through binding and subsequent protection of incoming foreign DNA during the process of internalization. DprA along with Single stranded DNA binding protein A (SsbA) acts as an accessory factor for RecA mediated DNA strand exchange. H. pylori DprA (HpDprA) is divided into an N-terminal domain and a C- terminal domain. In the present study, individual domains of HpDprA have been characterized for their ability to bind single stranded (ssDNA) and double stranded DNA (dsDNA). Oligomeric studies revealed that HpDprA possesses two sites for dimerization which enables HpDprA to form large and tightly packed complexes with ss and dsDNA. While the N-terminal domain was found to be sufficient for binding with ss or ds DNA, C-terminal domain has an important role in the assembly of poly-nucleoprotein complex. Using site directed mutagenesis approach, we show that a pocket comprising positively charged amino acids in the N-terminal domain has an important role in the binding of ss and dsDNA. Together, a functional cross talk between the two domains of HpDprA facilitating the binding and formation of higher order complex with DNA is discussed.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBinding SitesDNADNA-Binding ProteinsDNA, Single-StrandedEscherichia coliHelicobacter pyloriMembrane ProteinsMutagenesis, Site-DirectedNucleoproteinsProtein BindingProtein Interaction Domains and MotifsProtein MultimerizationRec A RecombinasesRecombinant ProteinsBacterial ProteinsDNADNA-Binding ProteinsDNA, Single-StrandedDprA protein, bacteriaMembrane ProteinsNucleoproteinsRec A RecombinasesRecombinant Proteins

Identifiers

PMID26135134
PMCPMC4489622

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.