Evidence map›Paper›PMID 26134566›Full record

ArticleThe Journal of biological chemistry2015

Intracellular Bacterial Pathogens Trigger the Formation of U Small Nuclear RNA Bodies (U Bodies) through Metabolic Stress Induction.

Jessica Tsalikis, Ivan Tattoli, Arthur Ling, Matthew T Sorbara, David O Croitoru, Dana J Philpott, Stephen E Girardin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jessica TsalikisDepartments of Laboratory Medicine and Pathobiology, University of Toronto, Toronto M6G 2T6, Canada.
Ivan TattoliDepartments of Laboratory Medicine and Pathobiology, University of Toronto, Toronto M6G 2T6, Canada; Departments of Immunology, University of Toronto, Toronto M6G 2T6, Canada.
Arthur LingDepartments of Laboratory Medicine and Pathobiology, University of Toronto, Toronto M6G 2T6, Canada.
Matthew T SorbaraDepartments of Immunology, University of Toronto, Toronto M6G 2T6, Canada.
David O CroitoruDepartments of Laboratory Medicine and Pathobiology, University of Toronto, Toronto M6G 2T6, Canada.
Dana J PhilpottDepartments of Immunology, University of Toronto, Toronto M6G 2T6, Canada.
Stephen E GirardinDepartments of Laboratory Medicine and Pathobiology, University of Toronto, Toronto M6G 2T6, Canada. Electronic address: stephen.girardin@utoronto.ca.
University of Toronto · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Invasive bacterial pathogens induce an amino acid starvation (AAS) response in infected host cells that controls host defense in part by promoting autophagy. However, whether AAS has additional significant effects on the host response to intracellular bacteria remains poorly characterized. Here we showed that Shigella, Salmonella, and Listeria interfere with spliceosomal U snRNA maturation in the cytosol. Bacterial infection resulted in the rerouting of U snRNAs and their cytoplasmic escort, the survival motor neuron (SMN) complex, to processing bodies, thus forming U snRNA bodies (U bodies). This process likely contributes to the decline in the cytosolic levels of U snRNAs and of the SMN complex proteins SMN and DDX20 that we observed in infected cells. U body formation was triggered by membrane damage in infected cells and was associated with the induction of metabolic stresses, such as AAS or endoplasmic reticulum stress. Mechanistically, targeting of U snRNAs to U bodies was regulated by translation initiation inhibition and the ATF4/ATF3 pathway, and U bodies rapidly disappeared upon removal of the stress, suggesting that their accumulation represented an adaptive response to metabolic stress. Importantly, this process likely contributed to shape the host response to invasive bacteria because down-regulation of DDX20 expression using short hairpin RNA (shRNA) amplified ATF3- and NF-κB-dependent signaling. Together, these results identify a critical role for metabolic stress and invasive bacterial pathogens in U body formation and suggest that this process contributes to host defense.

Indexed as

Activating Transcription Factor 3Activating Transcription Factor 4Cell MembraneCytoplasmDEAD Box Protein 20Gene Expression RegulationHeLa CellsHost-Pathogen InteractionsHumansListeria monocytogenesNF-kappa BPeptide Chain Initiation, TranslationalRNA, Small InterferingRNA, Small NuclearSalmonella typhimuriumShigella flexneriActivating Transcription Factor 3Activating Transcription Factor 4ATF3 protein, humanATF4 protein, humanDDX20 protein, humanDEAD Box Protein 20NF-kappa BRNA, Small InterferingRNA, Small NuclearSurvival of Motor Neuron 1 Proteinamino acidendoplasmic reticulum stress (ER stress)infectionListeriametabolic stressNF-κBSalmonella entericaShigellaU snRNA

Identifiers

PMID26134566
PMCPMC4543651
OpenAlexW1529659500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.