Evidence map›Paper›PMID 26134512›Full record

ArticleJournal of human genetics2015

Genetic mutations in human rectal cancers detected by targeted sequencing.

Jun Bai, Jinglong Gao, Zhijun Mao, Jianhua Wang, Jianhui Li, Wensheng Li, Yu Lei, Shuaishuai Li, Zhuo Wu, Chuanning Tang and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
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  3. Contextualizing molecular and structural aging across human organs.medRxiv : the preprint server for health sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 2 countries.

Jun BaiDepartment of Oncology, People's Hospital of Shaan Xi Province, Xi'an, China.
Jinglong GaoCentral Laboratory, People's Hospital of Shaan Xi Province, Xi'an, China.
Zhijun MaoDepartment of General Surgery, People's Hospital of Shaan Xi Province, Xi'an, China.
Jianhua WangDepartment of General Surgery, People's Hospital of Shaan Xi Province, Xi'an, China.
Jianhui LiDepartment of Oncology, People's Hospital of Shaan Xi Province, Xi'an, China.
Wensheng LiDepartment of Pathology, People's Hospital of Shaan Xi Province, Xi'an, China.
Yu LeiDepartment of Oncology, People's Hospital of Shaan Xi Province, Xi'an, China.
Shuaishuai LiCentral Laboratory, People's Hospital of Shaan Xi Province, Xi'an, China.
Zhuo WuCentral Laboratory, People's Hospital of Shaan Xi Province, Xi'an, China.
Chuanning TangSan Valley Biotechnology Incorporated, Beijing, China.
Lindsey JonesNorris Comprehensive Cancer Center, Department of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Hua YeSan Valley Biotechnology Incorporated, Beijing, China.
Feng LouSan Valley Biotechnology Incorporated, Beijing, China.
Zhiyuan LiuSan Valley Biotechnology Incorporated, Beijing, China.
Zhishou DongSan Valley Biotechnology Incorporated, Beijing, China.
Baishuai GuoSan Valley Biotechnology Incorporated, Beijing, China.
Xue F HuangNorris Comprehensive Cancer Center, Department of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Si-Yi ChenNorris Comprehensive Cancer Center, Department of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Enke ZhangCentral Laboratory, People's Hospital of Shaan Xi Province, Xi'an, China.
Shanxi Medical University · CNShaanxi Provincial People's Hospital · CNUniversity of Southern California · US

Funding

Overcoming Immune Suppression to Enhance Tumor Vaccine EfficacyR01CA090427 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, SI-YI · 2002 to 2013
$3.1M
Developing novel adjuvants for HIV vaccinationR01AI084811 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, SI-YI · 2009 to 2013
$2.2M
NCI NIH HHS R01 CA090427NCI NIH HHS R01 CA90427NIAID NIH HHS R01 AI084811
6 · The paper itself

Abstract

Colorectal cancer (CRC) is widespread with significant mortality. Both inherited and sporadic mutations in various signaling pathways influence the development and progression of the cancer. Identifying genetic mutations in CRC is important for optimal patient treatment and many approaches currently exist to uncover these mutations, including next-generation sequencing (NGS) and commercially available kits. In the present study, we used a semiconductor-based targeted DNA-sequencing approach to sequence and identify genetic mutations in 91 human rectal cancer samples. Analysis revealed frequent mutations in KRAS (58.2%), TP53 (28.6%), APC (16.5%), FBXW7 (9.9%) and PIK3CA (9.9%), and additional mutations in BRAF, CTNNB1, ERBB2 and SMAD4 were also detected at lesser frequencies. Thirty-eight samples (41.8%) also contained two or more mutations, with common combination mutations occurring between KRAS and TP53 (42.1%), and KRAS and APC (31.6%). DNA sequencing for individual cancers is of clinical importance for targeted drug therapy and the advantages of such targeted gene sequencing over other NGS platforms or commercially available kits in sensitivity, cost and time effectiveness may aid clinicians in treating CRC patients in the near future.

Indexed as

High-Throughput Nucleotide SequencingAdultAgedAged, 80 and overFemaleHumansMaleMiddle AgedMutationNeoplasm ProteinsRectal NeoplasmsNeoplasm Proteins

Identifiers

PMID26134512
PMCPMC7514872
OpenAlexW1819742989

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.