ArticleScientific reports2015
Uncovering miRNAs involved in crosstalk between nutrient deficiencies in Arabidopsis.
Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 41 papers.
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Who cites it
41 citing papers in PubMed.
- Improved Glycine max productivity in saline-sodic soils: coupling the impacts of urea-phosphate and magnesium oxide nanoparticles on the nutrient contents and growth-physiological attributes.BMC plant biology · 2025Article
- Sulfate Deficiency-Responsive MicroRNAs in Tomato Uncover an Expanded and Functionally Integrated Regulatory Network.International journal of molecular sciences · 2025Article
- miRNA mediated regulation of nitrogen response and nitrogen use efficiency of plants: the case of wheat.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- microRNA408 and its encoded peptide regulate sulfur assimilation and arsenic stress response in Arabidopsis.Plant physiology · 2023Article
- PotatoInternational journal of molecular sciences · 2023Article
- Role of miRNAs in sucrose stress response, reactive oxygen species, and anthocyanin biosynthesis inFrontiers in plant science · 2023Article
- Genome-wide identification of nitrate-responsive microRNAs by small RNA sequencing in the rice restorer cultivar Nanhui 511.Frontiers in plant science · 2023Article
- Small RNA-seq dataset of wild type and 16CData in brief · 2022Article
- Integrated analyses reveal the response of peanut to phosphorus deficiency on phenotype, transcriptome and metabolome.BMC plant biology · 2022Article
- MiRNA fine tuning for crop improvement: using advance computational models and biotechnological tools.Molecular biology reports · 2022Review
- The Evolution and Functional Roles ofInternational journal of molecular sciences · 2022Review
- Noncoding-RNA-Mediated Regulation in Response to Macronutrient Stress in Plants.International journal of molecular sciences · 2021Review
- fIdentification of B. napus small RNAs responsive to infection by a necrotrophic pathogen.BMC plant biology · 2021Article
- Downregulation of GeBP-like α factor by MiR827 suggests their involvement in senescence and phosphate homeostasis.BMC biology · 2021Article
- miRNAomic Approach to Plant Nitrogen Starvation.International journal of genomics · 2021Review
- Genome-wide analysis of long non-coding RNAs responsive to multiple nutrient stresses in Arabidopsis thaliana.Functional & integrative genomics · 2021Article
- Systemic Optimization of Legume Nodulation: A Shoot-Derived Regulator, miR2111.Frontiers in plant science · 2021Review
- Profiling of MicroRNAs and Their Targets in Roots and Shoots Reveals a Potential MiRNA-Mediated Interaction Network in Response to Phosphate Deficiency in the Forestry TreeFrontiers in genetics · 2021Article
- Interaction Between Macro- and Micro-Nutrients in Plants.Frontiers in plant science · 2021Review
- Roles of Non-Coding RNAs in Response to Nitrogen Availability in Plants.International journal of molecular sciences · 2020Review
Corrections and comments
- Erratum issued
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Integrating carbon (C), nitrogen (N), and sulfur (S) metabolism is essential for the growth and development of living organisms. MicroRNAs (miRNAs) play key roles in regulating nutrient metabolism in plants. However, how plant miRNAs mediate crosstalk between different nutrient metabolic pathways is unclear. In this study, deep sequencing of Arabidopsis thaliana small RNAs was used to reveal miRNAs that were differentially expressed in response to C, N, or S deficiency. Comparative analysis revealed that the targets of the differentially expressed miRNAs are involved in different cellular responses and metabolic processes, including transcriptional regulation, auxin signal transduction, nutrient homeostasis, and regulation of development. C, N, and S deficiency specifically induced miR169b/c, miR826 and miR395, respectively. In contrast, miR167, miR172, miR397, miR398, miR399, miR408, miR775, miR827, miR841, miR857, and miR2111 are commonly suppressed by C, N, and S deficiency. In particular, the miRNAs that are induced specifically by a certain nutrient deficiency are often suppressed by other nutrient deficiencies. Further investigation indicated that the modulation of nutrient-responsive miRNA abundance affects the adaptation of plants to nutrient starvation conditions. This study revealed that miRNAs function as important regulatory nodes of different nutrient metabolic pathways.
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