Evidence map›Paper›PMID 26132292›Full record

ArticlePloS one2015

Novel CYP27B1 Gene Mutations in Patients with Vitamin D-Dependent Rickets Type 1A.

Korcan Demir, Walaa E Kattan, Minjing Zou, Erdem Durmaz, Huda BinEssa, Özlem Nalbantoğlu, Roua A Al-Rijjal, Brian Meyer, Behzat Özkan, Yufei Shi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Vitamin D and Mineral Ion Regulation.Advances in experimental medicine and biology · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Molecular Analysis ofFrontiers in genetics · 2020
    Article
  17. Review
  18. Genetic and Clinical Characteristics of Patients with Vitamin D Dependent Rickets Type 1AJournal of clinical research in pediatric endocrinology · 2019
    Article
  19. Genetic Causes of Rickets.Journal of clinical research in pediatric endocrinology · 2017
    Review
  20. A Case of Vitamin D-Dependent Rickets Type 1A with a Novel Mutation in the Uzbek Population.Journal of clinical research in pediatric endocrinology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Korcan DemirDivision of Pediatric Endocrinology, Dr. Behçet Uz Children's Hospital, İzmir, Turkey.
Walaa E KattanCollege of Science and General Studies, Alfaisal University, Riyadh, Saudi Arabia; Department of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
Minjing ZouDepartment of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
Erdem DurmazDepartment of Pediatric Endocrinology, Sifa University, Bornova Health Application and Research Center, İzmir, Turkey.
Huda BinEssaDepartment of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
Özlem NalbantoğluDivision of Pediatric Endocrinology, Dr. Behçet Uz Children's Hospital, İzmir, Turkey.
Roua A Al-RijjalDepartment of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
Brian MeyerDepartment of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
Behzat ÖzkanDivision of Pediatric Endocrinology, Dr. Behçet Uz Children's Hospital, İzmir, Turkey.
Yufei ShiDepartment of Genetics, King Faisal Specialist Hospital & Research Centre, Riyadh, Saudi Arabia.
King Faisal Specialist Hospital & Research Centre · SADr. Behçet Uz Çocuk Hastalıkları Hastanesi · TRŞifa University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CYP27B1 gene encodes 25-hydroxyvitamin D-1α-hydroxylase. Mutations of this gene cause vitamin D-dependent rickets type 1A (VDDR-IA, OMIM 264700), which is a rare autosomal recessive disorder. To investigate CYP27B1 mutations, we studied 8 patients from 7 unrelated families. All coding exons and intron-exon boundaries of CYP27B1 gene were amplified by PCR from peripheral leukocyte DNA and subsequently sequenced. Homozygous mutations in the CYP27B1 gene were found in all the patients and heterozygous mutations were present in their normal parents. One novel single nucleotide variation (SNV, c.1215 T>C, p.R379R in the last nucleotide of exon 7) and three novel mutations were identified:, a splice donor site mutation (c.1215+2T>A) in intron 7, a 16-bp deletion in exon 6 (c.1022-1037del16), and a 2-bp deletion in exon 5 (c.934_935delAC). Both c.1215 T>C and c.1215+2T>A were present together in homozygous form in two unrelated patients, and caused exon 7 skipping. However, c.1215 T>C alone has no effect on pre-mRNA splicing. The skipping of exon 7 resulted in a shift of downstream reading frame and a premature stop codon 57 amino acids from L380 (p.L380Afs*57). The intra-exon deletions of c.1022-1037del16 and c.934_935delAC also resulted in a frameshift and the creation of premature stop codons at p.T341Rfs*5, and p.T312Rfs*19, respectively, leading to the functional inactivation of the CYP27B1 gene. Clinically, all the patients required continued calcitriol treatment and the clinical presentations were consistent with the complete loss of vitamin D1α-hydroxylase activity. In conclusion, three novel mutations have been identified. All of them caused frameshift and truncated proteins. The silent c.1215 T>C SNV has no effect on pre-mRNA splicing and it is likely a novel SNP. The current study further expands the CYP27B1 mutation spectrum.

Indexed as

Mutation25-Hydroxyvitamin D3 1-alpha-HydroxylaseChildChild, PreschoolExonsFamilial Hypophosphatemic RicketsFemaleHeterozygoteHomozygoteHumansInfantIntronsMalePolymerase Chain ReactionPolymorphism, Single NucleotideSequence Deletion25-Hydroxyvitamin D3 1-alpha-HydroxylaseCYP27B1 protein, human

Identifiers

PMID26132292
PMCPMC4489500
OpenAlexW1540545011

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.