Evidence map›Paper›PMID 26131556›Full record

ArticlePLoS genetics2015

Nmf9 Encodes a Highly Conserved Protein Important to Neurological Function in Mice and Flies.

Shuxiao Zhang, Kevin D Ross, Glen A Seidner, Michael R Gorman, Tiffany H Poon, Xiaobo Wang, Elizabeth M Keithley, Patricia N Lee, Mark Q Martindale, William J Joiner and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. bioRxiv : the preprint server for biology · 2026
    Article
  2. Inferring the genetic basis of sleep states inbioRxiv : the preprint server for biology · 2026
    Article
  3. Current Evidence for Sleep States inCurrent sleep medicine reports · 2026
    Review
  4. A Subcircuit in the Suprachiasmatic Nucleus Generates Wakefulness.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  5. mWAKE in the Central Amygdala Regulates Fear Learning and Memory.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  6. Article
  7. Article
  8. Orthologs ofSleep advances : a journal of the Sleep Research Society · 2024
    Article
  9. Article
  10. A conserved role forSleep advances : a journal of the Sleep Research Society · 2023
    Article
  11. Article
  12. Article
  13. eLife · 2021
    Article
  14. Characterization of mWake expression in the murine brain.The Journal of comparative neurology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shuxiao ZhangBiomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Kevin D RossBiomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Glen A SeidnerDepartment of Pharmacology, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Michael R GormanDepartment of Psychology, University of California, San Diego School of Medicine, La Jolla, California, United States of America; Center for Circadian Biology, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Tiffany H PoonBiomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Xiaobo WangDivision of Otolaryngology-Head and Neck Surgery, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Elizabeth M KeithleyDivision of Otolaryngology-Head and Neck Surgery, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Patricia N LeeKewalo Marine Lab, University of Hawaii, Honolulu, Hawaii, United States of America.
Mark Q MartindaleKewalo Marine Lab, University of Hawaii, Honolulu, Hawaii, United States of America.
William J JoinerBiomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, California, United States of America; Department of Pharmacology, University of California, San Diego School of Medicine, La Jolla, California, United States of America; Center for Circadian Biology, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
Bruce A HamiltonBiomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, California, United States of America; Department of Cellular and Molecular Medicine, Department of Medicine, University of California, San Diego Moores Cancer Center, and Institute for Genomic Medicine, University of California, San Diego School of Medicine, La Jolla, California, United States of America.
University of California, San Diego · USUniversity of Hawaii System · US

Funding

Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
GENETIC DISSECTION OF A NEURODEGENERATION PATHWAYR01MH059207 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1999 to 2008
$3.1M
Genetic Modifier Activity and Network Properties of Nxf1R01GM086912 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 2010 to 2020
$2.9M
Molecular and anatomical basis of sleep regulation by SLEEPLESSR01NS072431 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JOINER, WILLIAM J · 2011 to 2015
$1.7M
Synthetic Lethal Modifier of a New Ciliopathy GeneR01GM102958 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 2012 to 2015
$1.2M
Gene regulatory network evolution and the origin of biological noveltiesR01GM093116 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI MARTINDALE, MARK Q · 2010 to 2013
$1.1M
NIGMS NIH HHS R01 GM086912NIGMS NIH HHS R01 GM093116NIGMS NIH HHS R01 GM102958NIGMS NIH HHS T32 GM008666NIMH NIH HHS R01 MH059207NINDS NIH HHS R01 NS072431
6 · The paper itself

Abstract

Many protein-coding genes identified by genome sequencing remain without functional annotation or biological context. Here we define a novel protein-coding gene, Nmf9, based on a forward genetic screen for neurological function. ENU-induced and genome-edited null mutations in mice produce deficits in vestibular function, fear learning and circadian behavior, which correlated with Nmf9 expression in inner ear, amygdala, and suprachiasmatic nuclei. Homologous genes from unicellular organisms and invertebrate animals predict interactions with small GTPases, but the corresponding domains are absent in mammalian Nmf9. Intriguingly, homozygotes for null mutations in the Drosophila homolog, CG45058, show profound locomotor defects and premature death, while heterozygotes show striking effects on sleep and activity phenotypes. These results link a novel gene orthology group to discrete neurological functions, and show conserved requirement across wide phylogenetic distance and domain level structural changes.

Indexed as

AmygdalaAnimalsBase SequenceBehavior, AnimalCircadian RhythmCircadian Rhythm Signaling Peptides and ProteinsDrosophila melanogasterDrosophila ProteinsFearFemaleGene DeletionLocomotionMaleMiceMice, Inbred AKRMice, Inbred BALB CCircadian Rhythm Signaling Peptides and ProteinsDrosophila ProteinsNerve Tissue ProteinsNmf9 protein, mouseWake protein, Drosophila

Identifiers

PMID26131556
PMCPMC4488434
OpenAlexW769318812

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.