Evidence map›Paper›PMID 26130609›Full record

ArticleScientific reports2015

A novel alphaproteobacterial ectosymbiont promotes the growth of the hydrocarbon-rich green alga Botryococcus braunii.

Yuuhiko Tanabe, Yusuke Okazaki, Masaki Yoshida, Hiroshi Matsuura, Atsushi Kai, Takashi Shiratori, Ken-ichiro Ishida, Shin-ichi Nakano, Makoto M Watanabe

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 51 citations in OpenAlex.

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  16. Biotechnology for biofuels · 2018
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  17. Article
  18. Growth promotion of three microalgae,Biotechnology for biofuels · 2018
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Yuuhiko TanabeFaculty of Life &Environmental Sciences, University of Tsukuba.
Yusuke OkazakiCenter for Ecological Research, Kyoto University.
Masaki YoshidaFaculty of Life &Environmental Sciences, University of Tsukuba.
Hiroshi MatsuuraFaculty of Life &Environmental Sciences, University of Tsukuba.
Atsushi KaiFaculty of Life &Environmental Sciences, University of Tsukuba.
Takashi ShiratoriGraduate School of Life &Environmental Sciences, University of Tsukuba.
Ken-ichiro IshidaFaculty of Life &Environmental Sciences, University of Tsukuba.
Shin-ichi NakanoCenter for Ecological Research, Kyoto University.
Makoto M WatanabeFaculty of Life &Environmental Sciences, University of Tsukuba.
HUN-REN Centre for Ecological Research · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Botryococcus braunii is a colony-forming green alga that accumulates large amounts of liquid hydrocarbons within the colony. The utilization of B. braunii for biofuel production is however hindered by its low biomass productivity. Here we describe a novel bacterial ectosymbiont (BOTRYCO-2) that confers higher biomass productivity to B. braunii. 16S rDNA analysis indicated that the sequence of BOTRYCO-2 shows low similarity (<90%) to cultured bacterial species and located BOTRYCO-2 within a phylogenetic lineage consisting of uncultured alphaproteobacterial clones. Fluorescence in situ hybridization (FISH) studies and transmission electric microscopy indicated that BOTRYCO-2 is closely associated with B. braunii colonies. Interestingly, FISH analysis of a water bloom sample also found BOTRYCO-2 bacteria in close association with cyanobacterium Microcystis aeruginosa colonies, suggesting that BOTRYCO-2 relatives have high affinity to phytoplankton colonies. A PCR survey of algal bloom samples revealed that the BOTRYCO-2 lineage is commonly found in Microcystis associated blooms. Growth experiments indicated that B. braunii Ba10 can grow faster and has a higher biomass (1.8-fold) and hydrocarbon (1.5-fold) yield in the presence of BOTRYCO-2. Additionally, BOTRYCO-2 conferred a higher biomass yield to BOT-22, one of the fastest growing strains of B. braunii. We propose the species name 'Candidatus Phycosocius bacilliformis' for BOTRYCO-2.

Indexed as

SymbiosisAlphaproteobacteriaBiomassChlorophyllChlorophytaDNA, RibosomalHydrocarbonsMicroscopy, FluorescencePhylogenyChlorophyllDNA, RibosomalHydrocarbons

Identifiers

PMID26130609
PMCPMC4486929
OpenAlexW1865430464

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.