Evidence map›Paper›PMID 26127045›Full record

ArticleMedical physics2015

DTI template-based estimation of cardiac fiber orientations from 3D ultrasound.

Xulei Qin, Baowei Fei

Abstract read
In one paragraph

Article in Medical physics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Ultrasound Segmentation of Rat Hearts Using Convolution Neural Networks.Proceedings of SPIE--the International Society for Optical Engineering · 2018
    Article
  4. A new method to quantify fiber orientation similarity in registered volumes.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  5. Estimating cardiac fiber orientations in pig hearts using registered ultrasound and MR image volumes.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  6. Determining Cardiac Fiber Orientation Using FSL and Registered Ultrasound/DTI volumes.Proceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Xulei QinDepartment of Radiology and Imaging Sciences, Emory University School of Medicine, Atlanta, Georgia 30329.
Baowei FeiDepartment of Radiology and Imaging Sciences, Emory University School of Medicine, Atlanta, Georgia 30329; Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, Georgia 30329; Winship Cancer Institute of Emory University, Atlanta, Georgia 30329; and Department of Mathematics and Computer Science, Emory University, Atlanta, Georgia 30329.

Funding

uPAR Targeted in Vivo Molecular Magnetic Resonance Imaging of....P50CA128301 · NCI · EMORY UNIVERSITY · PI NYE, JONATHON A · 2008 to 2012
$6.8M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
Targeted fusion biopsy using anti-[18F]FACBC PET/CT and real-time 3D ultrasound gR21CA176684 · NCI · EMORY UNIVERSITY · PI FEI, BAOWEI, MASTER, VIRAJ · 2013 to 2014
$568k
NCI NIH HHS P50 CA128301NCI NIH HHS P50CA128301NCI NIH HHS R01 CA156775NCI NIH HHS R01CA156775NCI NIH HHS R21 CA176684NCI NIH HHS R21CA176684
6 · The paper itself

Abstract

purposeCardiac muscle fibers directly affect the mechanical, physiological, and pathological properties of the heart. Patient-specific quantification of cardiac fiber orientations is an important but difficult problem in cardiac imaging research. In this study, the authors proposed a cardiac fiber orientation estimation method based on three-dimensional (3D) ultrasound images and a cardiac fiber template that was obtained from magnetic resonance diffusion tensor imaging (DTI).

methodsA DTI template-based framework was developed to estimate cardiac fiber orientations from 3D ultrasound images using an animal model. It estimated the cardiac fiber orientations of the target heart by deforming the fiber orientations of the template heart, based on the deformation field of the registration between the ultrasound geometry of the target heart and the MRI geometry of the template heart. In the experiments, the animal hearts were imaged by high-frequency ultrasound, T1-weighted MRI, and high-resolution DTI.

resultsThe proposed method was evaluated by four different parameters: Dice similarity coefficient (DSC), target errors, acute angle error (AAE), and inclination angle error (IAE). Its ability of estimating cardiac fiber orientations was first validated by a public database. Then, the performance of the proposed method on 3D ultrasound data was evaluated by an acquired database. Their average values were 95.4% ± 2.0% for the DSC of geometric registrations, 21.0° ± 0.76° for AAE, and 19.4° ± 1.2° for IAE of fiber orientation estimations. Furthermore, the feasibility of this framework was also performed on 3D ultrasound images of a beating heart.

conclusionsThe proposed framework demonstrated the feasibility of using 3D ultrasound imaging to estimate cardiac fiber orientation of in vivo beating hearts and its further improvements could contribute to understanding the dynamic mechanism of the beating heart and has the potential to help diagnosis and therapy of heart disease.

Indexed as

Diffusion Magnetic Resonance ImagingAnimalsEchocardiography, Three-DimensionalImage Processing, Computer-AssistedMaleRatsRats, Sprague-Dawley

Identifiers

PMID26127045
PMCPMC4441706

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.