Evidence map›Paper›PMID 26126743›Full record

ArticleThe Journal of antibiotics2016

An overproduction of astellolides induced by genetic disruption of chromatin-remodeling factors in Aspergillus oryzae.

Yasutomo Shinohara, Makoto Kawatani, Yushi Futamura, Hiroyuki Osada, Yasuji Koyama

Open access · bronzeAbstract read
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In one paragraph

Article in The Journal of antibiotics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

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  14. Further Biochemical Profiling ofFrontiers in bioengineering and biotechnology · 2021
    Article
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  17. Article
  18. Taxonomy ofStudies in mycology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yasutomo ShinoharaNoda Institute for Scientific Research, Noda, Chiba, Japan.
Makoto KawataniChemical Biology Research Group, RIKEN CSRS, Wako, Saitama, Japan.
Yushi FutamuraChemical Biology Research Group, RIKEN CSRS, Wako, Saitama, Japan.
Hiroyuki OsadaChemical Biology Research Group, RIKEN CSRS, Wako, Saitama, Japan.
Yasuji KoyamaNoda Institute for Scientific Research, Noda, Chiba, Japan.
RIKEN · JPNoda Institute for Scientific Research · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The filamentous fungus Aspergillus oryzae is an important industrial mold. Recent genomic analysis indicated that A. oryzae has a large number of biosynthetic genes for secondary metabolites (SMs), but many of the SMs they produce have not been identified. For better understanding of SMs production by A. oryzae, we screened a gene-disruption library of transcription factors including chromatin-remodeling factors and found two gene disruptions that show similarly altered SM production profiles. One is a homolog of Aspergillus nidulans cclA, a component of the histone 3 lysine 4 (H3K4) methyltransferase complex of proteins associated with Set1 complex, and the other, sppA, is an ortholog of Saccharomyces cerevisiae SPP1, another component of a complex of proteins associated with Set1 complex. The cclA and sppA disruptions in A. oryzae are deficient in trimethylation of H3K4. Furthermore, one of the SMs that increased in the cclA disruptant was identified as astellolide F (14-deacetyl astellolide B). These data indicate that both cclA and sppA affect production of SMs including astellolides by affecting the methylation status of H3K4 in A. oryzae.

Indexed as

Aspergillus oryzaeChromatin Assembly and DisassemblyFungal ProteinsGene Expression Regulation, FungalMutationPolycyclic SesquiterpenesSesquiterpenes14-deacetyl astellolide A14-deacetyl astellolide BFungal ProteinsPolycyclic SesquiterpenesSesquiterpenes

Identifiers

PMID26126743
OpenAlexW1578369216

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.