Evidence map›Paper›PMID 26126630›Full record

ArticleArchives of toxicology2016

High-throughput characterization of chemical-associated embryonic behavioral changes predicts teratogenic outcomes.

David M Reif, Lisa Truong, David Mandrell, Skylar Marvel, Guozhu Zhang, Robert L Tanguay

Open access · hybridAbstract read
In one paragraph

Article in Archives of toxicology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 140 citations in OpenAlex.

  1. Review
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  12. Rapid Response ofToxics · 2024
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

David M ReifBioinformatics Research Center, Department of Biological Sciences, North Carolina State University, Raleigh, NC, USA.ORCID http://orcid.org/0000-0001-7815-6767
Lisa TruongSinnhuber Aquatic Research Laboratory, Department of Environmental and Molecular Toxicology, Environmental Health Sciences Center, Oregon State University, 28645 East Highway 34, Corvallis, OR, 97333, USA.
David MandrellSinnhuber Aquatic Research Laboratory, Department of Environmental and Molecular Toxicology, Environmental Health Sciences Center, Oregon State University, 28645 East Highway 34, Corvallis, OR, 97333, USA.
Skylar MarvelBioinformatics Research Center, Department of Biological Sciences, North Carolina State University, Raleigh, NC, USA.
Guozhu ZhangBioinformatics Research Center, Department of Biological Sciences, North Carolina State University, Raleigh, NC, USA.
Robert L TanguaySinnhuber Aquatic Research Laboratory, Department of Environmental and Molecular Toxicology, Environmental Health Sciences Center, Oregon State University, 28645 East Highway 34, Corvallis, OR, 97333, USA. robert.tanguay@oregonstate.edu.
North Carolina State University · USOregon State University · US

Funding

Research Experience and Training Coordination CoreP42ES016465 · NIEHS · OREGON STATE UNIVERSITY · PI Susan C Tilton · 2009 to 2026
$52.5M
STOCHASTIC ANALYSIS OF FLOW AND TRANSPORT PHENOMENAP42ES005948 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FRY, REBECCA · 1992 to 2017
$45.4M
Reducing Susceptibility to Environmental Stress Throughout the Life SpanP30ES000210 · NIEHS · OREGON STATE UNIVERSITY · PI BECKMAN, JOSEPH S · 1985 to 2015
$21.4M
Translational Research Support CoreP30ES025128 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Andrew R. Binder · 2015 to 2026
$18.3M
In vivo systems level analysis of gene-environment interactionsRC4ES019764 · NIEHS · OREGON STATE UNIVERSITY · PI TANGUAY, ROBYN L · 2010 to 2010
$1.9M
Advancing mechanism-based studies with cross-species chemical-phenotype dataR01ES023788 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MATTINGLY, CAROLYN J. · 2015 to 2019
$1.6M
Generation of a centralized and integrated resource for exposure dataR01ES019604 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MATTINGLY, CAROLYN J. · 2011 to 2015
$1.3M
NIEHS NIH HHS P30 ES000210NIEHS NIH HHS P30 ES025128NIEHS NIH HHS P42 ES005948NIEHS NIH HHS P42 ES016465NIEHS NIH HHS R01 ES019604NIEHS NIH HHS R01 ES023788NIEHS NIH HHS RC4 ES019764
6 · The paper itself

Abstract

New strategies are needed to address the data gap between the bioactivity of chemicals in the environment versus existing hazard information. We address whether a high-throughput screening (HTS) system using a vertebrate organism (embryonic zebrafish) can characterize chemical-elicited behavioral responses at an early, 24 hours post-fertilization (hpf) stage that predict teratogenic consequences at a later developmental stage. The system was used to generate full concentration-response behavioral profiles at 24 hpf across 1060 ToxCast™ chemicals. Detailed, morphological evaluation of all individuals was performed as experimental follow-up at 5 days post-fertilization (dpf). Chemicals eliciting behavioral responses were also mapped against external HTS in vitro results to identify specific molecular targets and neurosignalling pathways. We found that, as an integrative measure of normal development, significant alterations in movement highlighted active chemicals representing several modes of action. These early behavioral responses were predictive for 17 specific developmental abnormalities and mortality measured at 5 dpf, often at lower (i.e., more potent) concentrations than those at which morphological effects were observed. Therefore, this system can provide rapid characterization of chemical-elicited behavioral responses at an early developmental stage that are predictive of observable adverse effects later in life.

Indexed as

AnimalsBehavior, AnimalDose-Response Relationship, DrugEmbryo, NonmammalianHazardous SubstancesHigh-Throughput Screening AssaysPredictive Value of TestsTeratogensZebrafishHazardous SubstancesTeratogensAlternative testingBehaviorBioactivityBioinformaticsChemical biologyData integrationDevelopmental neurotoxicologyHigh-throughput screeningToxCastZebrafish

Identifiers

PMID26126630
PMCPMC4701642
OpenAlexW791534080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.