Evidence map›Paper›PMID 26124436›Full record

ArticleMolecular biology of the cell2015

Very-long-chain fatty acid sphingomyelin in nuclear lipid microdomains of hepatocytes and hepatoma cells: can the exchange from C24:0 to C16:0 affect signal proteins and vitamin D receptor?

Andrea Lazzarini, Antonio Macchiarulo, Alessandro Floridi, Alice Coletti, Samuela Cataldi, Michela Codini, Remo Lazzarini, Elisa Bartoccini, Giacomo Cascianelli, Francesco Saverio Ambesi-Impiombato and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Interplay between Vitamin D and Sphingolipids in Cardiometabolic Diseases.International journal of molecular sciences · 2023
    Review
  5. Article
  6. The Effect of Vitamin D3 and Silver Nanoparticles on HaCaT Cell Viability.International journal of molecular sciences · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Effect of 1α,25(OH)Cancers · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Andrea LazzariniLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy.
Antonio MacchiaruloDepartment of Pharmaceutical Science, University of Perugia, 06123 Perugia, Italy.
Alessandro FloridiLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy.
Alice ColettiDepartment of Pharmaceutical Science, University of Perugia, 06123 Perugia, Italy.
Samuela CataldiDepartment of Pharmaceutical Science, University of Perugia, 06123 Perugia, Italy.
Michela CodiniDepartment of Pharmaceutical Science, University of Perugia, 06123 Perugia, Italy.
Remo LazzariniLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy.
Elisa BartocciniLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy.
Giacomo CascianelliLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy.
Francesco Saverio Ambesi-ImpiombatoDepartment of Clinical and Biological Sciences, University of Udine, 33100 Udine, Italy.
Tommaso BeccariDepartment of Pharmaceutical Science, University of Perugia, 06123 Perugia, Italy.
Francesco CurcioDepartment of Clinical and Biological Sciences, University of Udine, 33100 Udine, Italy.
Elisabetta AlbiLaboratory of Nuclear Lipid BioPathology, CRABiON, 06100 Perugia, Italy elisabetta.albi@yahoo.com.
Crabion (Italy) · ITUniversity of Perugia · ITUniversity of Udine · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipid microdomains localized in the inner nuclear membrane are considered platforms for active chromatin anchoring. Stimuli such as surgery, vitamin D, or glucocorticoid drugs influence their gene expression, DNA duplication, and RNA synthesis. In this study, we used ultrafast liquid chromatography-tandem mass spectrometry to identify sphingomyelin (SM) species coupled with immunoblot analysis to comprehensively map differences in nuclear lipid microdomains (NLMs) purified from hepatocytes and hepatoma cells. We showed that NLMs lost saturated very-long-chain fatty acid (FA; C24:0) SM in cancer cells and became enriched in long-chain FA (C16:0) SM. We also found that signaling proteins, such as STAT3, Raf1, and PKCζ, were increased and vitamin D receptor was reduced in cancer cells. Because recent researches showed a shift in sphingolipid composition from C24:0 to C16:0 in relation to cell life, we performed a comparative analysis of properties among C16:0 SM, C24:0 SM, and cholesterol. Our results led us to hypothesize that the enrichment of C16:0 SM could determine enhanced dynamic properties of NLMs in cancer cells with an increased shuttling of protein signaling molecules.

Indexed as

AnimalsCholesterolFatty AcidsFemaleHepatocytesIntracellular Signaling Peptides and ProteinsLipid MetabolismLiver Neoplasms, ExperimentalMaleMembrane MicrodomainsNuclear EnvelopeRatsRats, Sprague-DawleyReceptors, CalcitriolSphingolipidsSphingomyelinsCholesterolFatty AcidsIntracellular Signaling Peptides and ProteinsReceptors, CalcitriolSphingolipidsSphingomyelins

Identifiers

PMID26124436
PMCPMC4571297
OpenAlexW2140863423

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.