Evidence map›Paper›PMID 26124271›Full record

ArticleThe Journal of biological chemistry2015

PHD3 Stabilizes the Tight Junction Protein Occludin and Protects Intestinal Epithelial Barrier Function.

Ying Chen, Hai-Sheng Zhang, Guo-Hua Fong, Qiu-Lei Xi, Guo-Hao Wu, Chen-Guang Bai, Zhi-Qiang Ling, Li Fan, Yi-Ming Xu, Yan-Qing Qin and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  5. Article
  6. PHD1-3 oxygen sensors in vivo-lessons learned from gene deletions.Pflugers Archiv : European journal of physiology · 2024
    Review
  7. Article
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  9. Article
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  11. Article
  12. Proline hydroxylation of CREB-regulated transcriptional coactivator 2 controls hepatic glucose metabolism.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Review
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  18. Article
  19. Article
  20. Oxygen-sensing mechanisms in development and tissue repair.Development (Cambridge, England) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 2 countries.

Ying ChenFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Hai-Sheng ZhangFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Guo-Hua Fongthe Center for Vascular Biology, University of Connecticut Health Center, Farmington, Connecticut 06030.
Qiu-Lei Xithe Department of Surgery, Zhongshan Hospital, Fudan University School of Medicine, Shanghai 200030, China.
Guo-Hao Wuthe Department of Surgery, Zhongshan Hospital, Fudan University School of Medicine, Shanghai 200030, China.
Chen-Guang Baithe Department of Pathology, Changhai Hospital, the Second Military Medical University, Shanghai 200433, China.
Zhi-Qiang Lingthe Department of Pathology, Zhejiang Cancer Research Institute, Zhejiang Cancer Hospital and Zhejiang Cancer Center, Hangzhou 310022, China, and.
Li FanFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Yi-Ming XuFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Yan-Qing QinFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Tang-Long YuanFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Heng SunFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Jing FangFrom the Laboratory of Food Safety Research, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China, the Key Laboratory of Food Safety Risk Assessment, Ministry of Health, Beijing 100021 China jfang@sibs.ac.cn.
Shanghai Institutes for Biological Sciences · CNChinese Academy of Sciences · CNChanghai Hospital · CNFudan University · CNThe First Affiliated Hospital, Sun Yat-sen University · CNUConn Health · USZhejiang Cancer Hospital · CN

Funding

Spatial cues for retinal angiogenesisR01EY019721 · NEI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI FONG, GUO-HUA · 2009 to 2019
$4.9M
6 · The paper itself

Abstract

Prolyl hydroxylase domain proteins (PHDs) control cellular adaptation to hypoxia. PHDs are found involved in inflammatory bowel disease (IBD); however, the exact role of PHD3, a member of the PHD family, in IBD remains unknown. We show here that PHD3 plays a critical role in maintaining intestinal epithelial barrier function. We found that genetic ablation of Phd3 in intestinal epithelial cells led to spontaneous colitis in mice. Deletion of PHD3 decreases the level of tight junction protein occludin, leading to a failure of intestinal epithelial barrier function. Further studies indicate that PHD3 stabilizes occludin by preventing the interaction between the E3 ligase Itch and occludin, in a hydroxylase-independent manner. Examination of biopsy of human ulcerative colitis patients indicates that PHD3 is decreased with disease severity, indicating that PHD3 down-regulation is associated with progression of this disease. We show that PHD3 protects intestinal epithelial barrier function and reveal a hydroxylase-independent function of PHD3 in stabilizing occludin. These findings may help open avenues for developing a therapeutic strategy for IBD.

Indexed as

AnimalsColitisGene DeletionHEK293 CellsHumansIntestinal MucosaMiceMice, TransgenicOccludinProcollagen-Proline DioxygenaseOccludinOcln protein, mousePHD3 protein, mouseProcollagen-Proline Dioxygenasecell biologycolitisinflammatory bowel disease (IBD)intestinal epitheliumoccludinprolyl hydroxylasetight junction

Identifiers

PMID26124271
PMCPMC4536461
OpenAlexW2195770199

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.