Evidence map›Paper›PMID 26124109›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

The MYB36 transcription factor orchestrates Casparian strip formation.

Takehiro Kamiya, Monica Borghi, Peng Wang, John M C Danku, Lothar Kalmbach, Prashant S Hosmani, Sadaf Naseer, Toru Fujiwara, Niko Geldner, David E Salt

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 311 citations in OpenAlex.

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  19. Transcriptional regulation of thorn tip sclerification in plants.Proceedings of the National Academy of Sciences of the United States of America · 2025
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71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Takehiro KamiyaInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom;
Monica BorghiInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom;
Peng WangInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom;
John M C DankuInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom;ORCID http://orcid.org/0000-0002-5103-3852
Lothar KalmbachDepartment of Plant Molecular Biology, University of Lausanne-Sorge, 1015 Lausanne, Switzerland;
Prashant S HosmaniInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom;
Sadaf NaseerDepartment of Plant Molecular Biology, University of Lausanne-Sorge, 1015 Lausanne, Switzerland;
Toru FujiwaraGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan.
Niko GeldnerDepartment of Plant Molecular Biology, University of Lausanne-Sorge, 1015 Lausanne, Switzerland;
David E SaltInstitute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom; david.salt@abdn.ac.uk.
University of Aberdeen · GBUniversity of Lausanne · CHThe University of Tokyo · JP

Funding

Biotechnology and Biological Sciences Research Council BB/L027739/1
6 · The paper itself

Abstract

The endodermis in roots acts as a selectivity filter for nutrient and water transport essential for growth and development. This selectivity is enabled by the formation of lignin-based Casparian strips. Casparian strip formation is initiated by the localization of the Casparian strip domain proteins (CASPs) in the plasma membrane, at the site where the Casparian strip will form. Localized CASPs recruit Peroxidase 64 (PER64), a Respiratory Burst Oxidase Homolog F, and Enhanced Suberin 1 (ESB1), a dirigent-like protein, to assemble the lignin polymerization machinery. However, the factors that control both expression of the genes encoding this biosynthetic machinery and its localization to the Casparian strip formation site remain unknown. Here, we identify the transcription factor, MYB36, essential for Casparian strip formation. MYB36 directly and positively regulates the expression of the Casparian strip genes CASP1, PER64, and ESB1. Casparian strips are absent in plants lacking a functional MYB36 and are replaced by ectopic lignin-like material in the corners of endodermal cells. The barrier function of Casparian strips in these plants is also disrupted. Significantly, ectopic expression of MYB36 in the cortex is sufficient to reprogram these cells to start expressing CASP1-GFP, correctly localize the CASP1-GFP protein to form a Casparian strip domain, and deposit a Casparian strip-like structure in the cell wall at this location. These results demonstrate that MYB36 is controlling expression of the machinery required to locally polymerize lignin in a fine band in the cell wall for the formation of the Casparian strip.

Indexed as

AllelesArabidopsisArabidopsis ProteinsCell MembraneCell WallEndodermGene Expression ProfilingGene Expression Regulation, PlantGenetic Complementation TestGreen Fluorescent ProteinsLigninMutationPhenotypePlant RootsPlasmidsPolymerase Chain ReactionArabidopsis ProteinsGreen Fluorescent ProteinsLigninMYB36 protein, ArabidopsisTranscription FactorsCasparian stripcell wallendodermislignintranscription factor

Identifiers

PMID26124109
PMCPMC4547244
OpenAlexW2113366851

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.