Evidence map›Paper›PMID 26124104›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Circadian clock gene LATE ELONGATED HYPOCOTYL directly regulates the timing of floral scent emission in Petunia.

Myles P Fenske, Kristen D Hewett Hazelton, Andrew K Hempton, Jae Sung Shim, Breanne M Yamamoto, Jeffrey A Riffell, Takato Imaizumi

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 119 citations in OpenAlex.

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  6. CanGenes · 2025
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  16. Article
  17. DiverseHorticulture research · 2023
    Article
  18. Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Myles P FenskeDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Kristen D Hewett HazeltonDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Andrew K HemptonDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Jae Sung ShimDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Breanne M YamamotoDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Jeffrey A RiffellDepartment of Biology, University of Washington, Seattle, WA 98195-1800.
Takato ImaizumiDepartment of Biology, University of Washington, Seattle, WA 98195-1800 takato@u.washington.edu.
University of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Molecular Mechanisms of Seasonal Time MeasurementR01GM079712 · NIGMS · UNIVERSITY OF WASHINGTON · PI IMAIZUMI, TAKATO · 2007 to 2022
$3.5M
NIGMS NIH HHS GM079712NIGMS NIH HHS R01 GM079712NIGMS NIH HHS T32 GM007270NIGMS NIH HHS T32GM007270
6 · The paper itself

Abstract

Flowers present a complex display of signals to attract pollinators, including the emission of floral volatiles. Volatile emission is highly regulated, and many species restrict emissions to specific times of the day. This rhythmic emission of scent is regulated by the circadian clock; however, the mechanisms have remained unknown. In Petunia hybrida, volatile emissions are dominated by products of the floral volatile benzenoid/phenylpropanoid (FVBP) metabolic pathway. Here we demonstrate that the circadian clock gene P. hybrida LATE ELONGATED HYPOCOTYL (LHY; PhLHY) regulates the daily expression patterns of the FVBP pathway genes and floral volatile production. PhLHY expression peaks in the morning, antiphasic to the expression of P. hybrida GIGANTEA (PhGI), the master scent regulator ODORANT1 (ODO1), and many other evening-expressed FVBP genes. Overexpression phenotypes of PhLHY in Arabidopsis caused an arrhythmic clock phenotype, which resembles those of LHY overexpressors. In Petunia, constitutive expression of PhLHY depressed the expression levels of PhGI, ODO1, evening-expressed FVBP pathway genes, and FVBP emission in flowers. Additionally, in the Petunia lines in which PhLHY expression was reduced, the timing of peak expression of PhGI, ODO1, and the FVBP pathway genes advanced to the morning. Moreover, PhLHY protein binds to cis-regulatory elements called evening elements that exist in promoters of ODO1 and other FVBP genes. Thus, our results imply that PhLHY directly sets the timing of floral volatile emission by restricting the expression of ODO1 and other FVBP genes to the evening in Petunia.

Indexed as

Genes, PlantOdorantsArabidopsisCircadian ClocksDarknessFlowersGene Expression ProfilingGene Expression Regulation, PlantMetabolic Networks and PathwaysMolecular Sequence DataPetuniaPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticPropanolsSequence Homology, Amino Acid1-phenylpropanolPlant ProteinsPropanolsVolatile Organic Compoundsbenzenoidscircadian rhythmfloral volatileLHYPetunia hybrida

Identifiers

PMID26124104
PMCPMC4534231
OpenAlexW1916252933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.