Evidence map›Paper›PMID 26123483›Full record

ArticleScientific reports2015

A novel embryonic plasticity gene signature that predicts metastatic competence and clinical outcome.

Rama Soundararajan, Anurag N Paranjape, Valentin Barsan, Jeffrey T Chang, Sendurai A Mani

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Acetylated HOXB13 Regulated Super Enhancer Genes Define Therapeutic Vulnerabilities of Castration-Resistant Prostate Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
  7. Article
  8. Article
  9. Embryonic Programs in Cancer and Metastasis-Insights From the Mammary Gland.Frontiers in cell and developmental biology · 2022
    Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. TRA-1-60-positive/CD45Heliyon · 2020
    Article
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Rama SoundararajanDepartment of Translational Molecular Pathology.
Anurag N ParanjapeDepartment of Translational Molecular Pathology.
Valentin BarsanDepartment of Translational Molecular Pathology.
Jeffrey T ChangDepartment of Integrative Biology and Pharmacology, School of Medicine; School of Biomedical Informatics; The University of Texas Health Sciences Center at Houston, Houston, Texas.
Sendurai A Mani1] Department of Translational Molecular Pathology [2] Metastasis Research Center [3] Center for Stem Cells and Developmental Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Center for Translational Molecular Medicine · NL

Funding

Pleiotropic functions of FOXC2 in EMT, stem cells and breast cancer progressionR01CA155243 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MANI, SENDURAI AYYAVOO · 2011 to 2022
$3.2M
Functional Components of the Rb/E2F and p53 PathwaysR00LM009837 · NLM · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHANG, JEFFREY T · 2010 to 2012
$699k
NCI NIH HHS CA155243-01NCI NIH HHS R01 CA155243NLM NIH HHS R00 LM009837NLM NIH HHS R00LM009837
6 · The paper itself

Abstract

Currently, very few prognosticators accurately predict metastasis in cancer patients. In order to complete the metastatic cascade and successfully colonize distant sites, carcinoma cells undergo dynamic epithelial-mesenchymal-transition (EMT) and its reversal, mesenchymal-epithelial-transition (MET). While EMT-centric signatures correlate with response to therapy, they are unable to predict metastatic outcome. One reason is due to the wide range of transient phenotypes required for a tumor cell to disseminate and recreate a similar histology at distant sites. Since such dynamic cellular processes are also seen during embryo development (epithelial-like epiblast cells undergo transient EMT to generate the mesoderm, which eventually redifferentiates into epithelial tissues by MET), we sought to utilize this unique and highly conserved property of cellular plasticity to predict metastasis. Here we present the identification of a novel prognostic gene expression signature derived from mouse embryonic day 6.5 that is representative of extensive cellular plasticity, and predicts metastatic competence in human breast tumor cells. This signature may thus complement conventional clinical parameters to offer accurate prediction for outcome among multiple classes of breast cancer patients.

Indexed as

Epithelial-Mesenchymal TransitionAnimalsBreast NeoplasmsCell Line, TumorDisease-Free SurvivalFemaleGene Expression Regulation, DevelopmentalGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateMiceMouse Embryonic Stem CellsNeoplasm MetastasisTranscriptomeTreatment Outcome

Identifiers

PMID26123483
PMCPMC4485318
OpenAlexW1601327278

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.