Evidence map›Paper›PMID 26121563›Full record

ArticleRNA biology2015

Passenger strand loading in overexpression experiments using microRNA mimics.

Rolf Søkilde, Inga Newie, Helena Persson, Åke Borg, Carlos Rovira

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  8. Exploring microRNAs in craniofacial regenerative medicine.Biochemical Society transactions · 2023
    Review
  9. Review
  10. Review
  11. Article
  12. MicroRNA-Based Diagnosis and Therapy.International journal of molecular sciences · 2022
    Review
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  14. Article
  15. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Rolf Søkildea Department of Clinical Sciences, Lund ; Division of Oncology and Pathology ; Lund University Cancer Center at Medicon Village ; Lund , Sweden.
Inga Newie
Helena Persson
Åke Borg
Carlos Rovira
Lund University · SEMemorialCare Health System · USMedicon Village · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are important regulators of gene function and manipulation of miRNAs is a central component of basic research. Modulation of gene expression by miRNA gain-of-function can be based on different approaches including transfection with miRNA mimics; artificial, chemically modified miRNA-like small RNAs. These molecules are intended to mimic the function of a miRNA guide strand while bypassing the maturation steps of endogenous miRNAs. Due to easy accessibility through commercial providers this approach has gained popularity, and accuracy is often assumed without prior independent testing. Our in silico analysis of over-represented sequence motifs in microarray expression data and sequencing of AGO-associated small RNAs indicate, however, that miRNA mimics may be associated with considerable side-effects due to the unwanted activity of the miRNA mimic complementary strand.

Indexed as

Gene Expression RegulationArgonaute ProteinsBase SequenceBinding SitesCell LineCell Line, TumorComputer SimulationGene Expression ProfilingHumansMicroRNAsNucleotide MotifsRNAArgonaute ProteinsMicroRNAsMIRN4728 microRNA, humanMIRN486 microRNA, humanRNAAGO, ArgonauteArgonaute proteinGEO, Gene Expression OmnibusHITS-CLIP, high-throughput sequencing of RNA isolated by crosslinking immunoprecipitationmicroRNAmimicmiRNA, microRNAmRNA, mRNAnt, nucleotideOAS, oligoadenylate synthetaseoff-target effectpassenger strandPKR, protein kinase RRISC, RNA-induced silencing complexRNA interferencesiRNATLR3, Toll-like receptor 3

Identifiers

PMID26121563
PMCPMC4615182
OpenAlexW1887258397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.