Evidence map›Paper›PMID 26120031›Full record

ArticleDevelopmental cell2015

Chloroplast Stromules Function during Innate Immunity.

Jeffrey L Caplan, Amutha Sampath Kumar, Eunsook Park, Meenu S Padmanabhan, Kyle Hoban, Shannon Modla, Kirk Czymmek, Savithramma P Dinesh-Kumar

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 174 papers.

0numbers the graph read from it
0cells of the map it votes in
174citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

174 citing papers in PubMed, 346 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Chloroplasts and Plant Sustainability: Key Roles and Emerging Insights.International journal of molecular sciences · 2026
    Review
  11. Singlet Oxygen Generation and Signaling in Higher Plants.International journal of molecular sciences · 2026
    Review
  12. Article
  13. Frontiers in plant science · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review

114 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jeffrey L CaplanDepartment of Biological Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA. Electronic address: jcaplan@udel.edu.
Amutha Sampath KumarDepartment of Biological Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA.
Eunsook ParkDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, Davis, CA 95616, USA.
Meenu S PadmanabhanDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, Davis, CA 95616, USA.
Kyle HobanDepartment of Biological Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA.
Shannon ModlaDepartment of Biological Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA.
Kirk CzymmekDepartment of Biological Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA.
Savithramma P Dinesh-KumarDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, Davis, CA 95616, USA. Electronic address: spdineshkumar@ucdavis.edu.
University of California, Davis · USBiotechnology Institute · USUniversity of Delaware · US

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI Anjana Narayan Bhat · 2012 to 2026
$67.2M
Study of chloroplast stromules during PCD and inter-organellar communicationR01GM097587 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CAPLAN, JEFFREY L, DINESH-KUMAR, SAVITHRAMMA P · 2011 to 2017
$1.6M
Acquisition of a Zeiss LSM710 Confocal MicroscopeS10RR027273 · NCRR · UNIVERSITY OF DELAWARE · PI DUNCAN, MELINDA K · 2010 to 2010
$494k
NCRR NIH HHS S10 RR027273NCRR NIH HHS S10RR027273NIGMS NIH HHS GM097587NIGMS NIH HHS P20 GM103446NIGMS NIH HHS R01 GM097587
6 · The paper itself

Abstract

Inter-organellar communication is vital for successful innate immune responses that confer defense against pathogens. However, little is known about how chloroplasts, which are a major production site of pro-defense molecules, communicate and coordinate with other organelles during defense. Here we show that chloroplasts send out dynamic tubular extensions called stromules during innate immunity or exogenous application of the pro-defense signals, hydrogen peroxide (H2O2) and salicylic acid. Interestingly, numerous stromules surround nuclei during defense response, and these connections correlate with an accumulation of chloroplast-localized NRIP1 defense protein and H2O2 in the nucleus. Furthermore, silencing and knockout of chloroplast unusual positioning 1 (CHUP1) that encodes a chloroplast outer envelope protein constitutively induces stromules in the absence of pathogen infection and enhances programmed cell death. These results support a model in which stromules aid in the amplification and/or transport of pro-defense signals into the nucleus and other subcellular compartments during immunity.

Indexed as

ArabidopsisArabidopsis ProteinsChloroplastsHydrogen PeroxideImmunity, InnatePlant LeavesArabidopsis ProteinsHydrogen Peroxide

Identifiers

PMID26120031
PMCPMC4596411
OpenAlexW1936918591

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.