Evidence map›Paper›PMID 26119945›Full record

ArticleOncogene2016

Comparative genetic study of intratumoral heterogenous MYCN amplified neuroblastoma versus aggressive genetic profile neuroblastic tumors.

A P Berbegall, E Villamón, M Piqueras, I Tadeo, A Djos, P F Ambros, T Martinsson, I M Ambros, A Cañete, V Castel and 2 more

Open access · bronzeAbstract readComparative Study
PubMed Publisher
In one paragraph

Article in Oncogene, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
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  5. Article
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  8. An overview of neuroblastoma cell lineage phenotypes andExperimental biology and medicine (Maywood, N.J.) · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Impact of Disseminated Neuroblastoma Cells on the Identification of the Relapse-Seeding Clone.Clinical cancer research : an official journal of the American Association for Cancer Research · 2017
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Advancing Clinicopathologic Diagnosis of High-risk Neuroblastoma Using Computerized Image Analysis and Proteomic Profiling.Pediatric and developmental pathology : the official journal of the Society for Pediatric Pathology and the Paediatric Pathology Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

A P BerbegallPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
E VillamónPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
M PiquerasPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
I TadeoPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
A DjosDepartment of Medical and Clinical Genetics, Sahlgrenska Academy at the University of Gothenburg, Gothenburg, Sweden.
P F AmbrosCCRI, Children's Cancer Research Institute, St Anna Kinderkrebsforschung, Vienna, Austria.
T MartinssonDepartment of Medical and Clinical Genetics, Sahlgrenska Academy at the University of Gothenburg, Gothenburg, Sweden.
I M AmbrosCCRI, Children's Cancer Research Institute, St Anna Kinderkrebsforschung, Vienna, Austria.
A CañetePediatric Oncology Unit, Hospital Universitario y Politécnico La Fé, Valencia, Spain.
V CastelPediatric Oncology Unit, Hospital Universitario y Politécnico La Fé, Valencia, Spain.
S NavarroPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
R NogueraPathology Department, Medical School, University of Valencia, Medical Research Foundation, INCLIVA, Valencia, Spain.
Universitat de València · ESHospital Universitari i Politècnic La Fe · ESUniversity of Gothenburg · SEINCLIVA Health Research Institute · ESSt. Anna Children's Cancer Research InstituteSt Anna Children's Hospital · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intratumoral heterogeneous MYCN amplification (hetMNA) is an unusual event in neuroblastoma with unascertained biological and clinical implications. Diagnosis is based on the detection of MYCN amplification surrounded by non-amplified tumor cells by fluorescence in situ hybridization (FISH). To better define the genetic features of hetMNA tumors, we studied the Spanish cohort of neuroblastic tumors by FISH and single nucleotide polymorphism arrays. We compared hetMNA tumors with homogeneous MNA (homMNA) and nonMNA tumors with 11q deletion (nonMNA w11q-). Of 1091 primary tumors, 28 were hetMNA by FISH. Intratumoral heterogeneity of 1p, 2p, 11q and 17q was closely associated with hetMNA tumors when analyzing different pieces for each case. For chromosome 2, 16 cases showed 2p intact, 4 focal gain at 2p24.3 and 8 MNA. The lengths of the smallest regions of overlap (SROs) for 2p gains and 1p deletions were between the SRO lengths observed in homMNA and nonMNA w11q- tumors. Co-occurrence of 11q- and +17q was frequently found with the largest SROs for both aberrations. The evidence for and frequency of different genetic subpopulations representing a hallmark of the hetMNA subgroup of NB indicates, on one hand, the presence of a considerable genetic instability with different SRO of either gains and losses compared with those of the other NB groups and highlights and, on the other hand, the need for multiple sampling from distant and macroscopically and microscopically distinct tumor areas. Narrowing down the different SRO for both deletions and gains in NB groups would be crucial to pinpointing the candidate gene(s) and the critical gene dosage with prognostic and therapeutic significance. This complexity of segmental chromosomal aberration patterns reinforces the necessity for a larger cohort study using FISH and pangenomic techniques to develop a suitable therapeutic strategy for these patients.

Indexed as

AdolescentAdultAgedAged, 80 and overChildChild, PreschoolChromosome DeletionChromosomes, Human, Pair 1Chromosomes, Human, Pair 11Chromosomes, Human, Pair 17Chromosomes, Human, Pair 2Cohort StudiesGene DosageHumansIn Situ Hybridization, FluorescenceMiddle AgedMYCN protein, humanN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogene Proteins

Identifiers

PMID26119945
OpenAlexW1545638660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.