Evidence map›Paper›PMID 26119791›Full record

ArticleExperimental animals2015

Expression and intracellular localization of TBC1D9, a Rab GTPase-accelerating protein, in mouse testes.

Yutaka Nakamura, Atsushi Asano, Yoshinao Hosaka, Takashi Takeuchi, Toshihiko Iwanaga, Yoshiaki Yamano

Open access · diamondAbstract read
In one paragraph

Article in Experimental animals, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Mitophagy and spermatogenesis: Role and mechanisms.Biochemistry and biophysics reports · 2024
    Review
  4. Development & reproduction · 2024
    Article
  5. Prediction of male fertility using Ras-related proteins.Journal of animal science and technology · 2022
    Article
  6. Article
  7. Mitochondrial dynamics during spermatogenesis.Journal of cell science · 2020
    Review
  8. Sperm Differentiation: The Role of Trafficking of Proteins.International journal of molecular sciences · 2020
    Review
  9. TBC1D9 regulates TBK1 activation through CaNature communications · 2020
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yutaka NakamuraLaboratory of Veterinary Biochemistry, Faculty of Agriculture, Tottori University, Japan.
Atsushi Asano
Yoshinao Hosaka
Takashi Takeuchi
Toshihiko Iwanaga
Yoshiaki Yamano
Tottori University · JPHokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Membrane trafficking in male germ cells contributes to their development via cell morphological changes and acrosome formation. TBC family proteins work as Rab GTPase accelerating proteins (GAPs), which negatively regulate Rab proteins, to mediate membrane trafficking. In this study, we analyzed the expression of a Rab GAP, TBC1D9, in mouse organs and the intracellular localization of the gene products. Tbc1d9 showed abundant expression in adult mice testis. We found that the Tbc1d9 mRNA was expressed in primary and secondary spermatocytes, and that the TBC1D9 protein was expressed in spermatocytes and round spermatids. In 293T cells, TBC1D9-GFP proteins were localized in the endosome and Golgi apparatus. Compartments that were positive for the constitutive active mutants of Rab7 and Rab9 were also positive for TBC1D9 isoform 1. In addition, TBC1D9 proteins were associated with Rab7 and Rab9, respectively. These results indicate that TBC1D9 is expressed mainly in spermatocytes, and suggest that TBC1D9 regulates membrane trafficking pathways related to Rab9- or Rab7-positive vesicles.

Indexed as

AnimalsCell MembraneEndosomesGene ExpressionGolgi ApparatusGTPase-Activating ProteinsHEK293 CellsHumansMaleMembrane Transport ModulatorsMice, Inbred C57BLrab7 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, MessengerSpermatidsSpermatocytesGTPase-Activating ProteinsMembrane Transport Modulatorsrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, humanrab7 GTP-binding proteins, mouserab9 protein, mouserab GTP-Binding ProteinsRNA, MessengerTBC1D9 protein, mouse

Identifiers

PMID26119791
PMCPMC4637379
OpenAlexW811160796

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.