Evidence map›Paper›PMID 26119570›Full record

ReviewNature reviews. Microbiology2015

Discovery of microbial natural products by activation of silent biosynthetic gene clusters.

Peter J Rutledge, Gregory L Challis

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature reviews. Microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 473 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
473citing papers in PubMed, 1 pooled it
73.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

473 citing papers in PubMed, 1 synthesis or guideline pooled it, 947 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Comparative Genome Mining ofMarine drugs · 2026
    Article
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  8. Article
  9. Article
  10. Review
  11. Review
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  15. The Underexplored GenusMarine drugs · 2026
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

413 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Peter J RutledgeSchool of Chemistry, The University of Sydney, New South Wales 2006, Australia.
Gregory L ChallisDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
University of Sydney · AUUniversity of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/K002341/1Biotechnology and Biological Sciences Research Council BB/L010852/1Biotechnology and Biological Sciences Research Council BB/L023342/1)Biotechnology and Biological Sciences Research Council BB/M017982/1Medical Research Council MR/N501839/1
6 · The paper itself

Abstract

Microorganisms produce a wealth of structurally diverse specialized metabolites with a remarkable range of biological activities and a wide variety of applications in medicine and agriculture, such as the treatment of infectious diseases and cancer, and the prevention of crop damage. Genomics has revealed that many microorganisms have far greater potential to produce specialized metabolites than was thought from classic bioactivity screens; however, realizing this potential has been hampered by the fact that many specialized metabolite biosynthetic gene clusters (BGCs) are not expressed in laboratory cultures. In this Review, we discuss the strategies that have been developed in bacteria and fungi to identify and induce the expression of such silent BGCs, and we briefly summarize methods for the isolation and structural characterization of their metabolic products.

Indexed as

Multigene FamilyBacteriaBacterial ProteinsBiological ProductsGene Expression Regulation, BacterialSilencer Elements, TranscriptionalBacterial ProteinsBiological Products

Identifiers

PMID26119570
OpenAlexW1827213771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.