Evidence map›Paper›PMID 26119498›Full record

ArticleFungal genetics and biology : FG & B2015

A second component of the SltA-dependent cation tolerance pathway in Aspergillus nidulans.

Laura Mellado, Ana Maria Calcagno-Pizarelli, Robin A Lockington, Marc S Cortese, Joan M Kelly, Herbert N Arst, Eduardo A Espeso

Open access · hybridAbstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  4. The CAntimicrobial agents and chemotherapy · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Laura MelladoDepartamento de Biología Celular y Molecular, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain.
Ana Maria Calcagno-PizarelliSection of Microbiology, Imperial College London, Flowers Building, Armstrong Road, London SW7 2AZ, UK.
Robin A LockingtonDepartment of Genetics and Evolution, University of Adelaide, Adelaide, South Australia 5005, Australia.
Marc S CorteseDept. of Applied Chemistry, Faculty of Chemistry, University of the Basque Country, Manuel de Lardizabal, 3, 20018 San Sebastian, Spain.
Joan M KellyDepartment of Genetics and Evolution, University of Adelaide, Adelaide, South Australia 5005, Australia.
Herbert N ArstDepartamento de Biología Celular y Molecular, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain; Section of Microbiology, Imperial College London, Flowers Building, Armstrong Road, London SW7 2AZ, UK.
Eduardo A EspesoDepartamento de Biología Celular y Molecular, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain. Electronic address: eespeso@cib.csic.es.
Centro de Investigaciones Biológicas Margarita Salas · ESImperial College London · GBUniversity of Adelaide · AUUniversity of the Basque Country · ES

Funding

Biotechnology and Biological Sciences Research Council BB/F01189/X1Biotechnology and Biological Sciences Research Council BB/F01189X/1Wellcome TrustWellcome Trust 084660/Z/08/Z
6 · The paper itself

Abstract

The transcriptional response to alkali metal cation stress is mediated by the zinc finger transcription factor SltA in Aspergillus nidulans and probably in other fungi of the pezizomycotina subphylum. A second component of this pathway has been identified and characterized. SltB is a 1272 amino acid protein with at least two putative functional domains, a pseudo-kinase and a serine-endoprotease, involved in signaling to the transcription factor SltA. Absence of SltB activity results in nearly identical phenotypes to those observed for a null sltA mutant. Hypersensitivity to a variety of monovalent and divalent cations, and to medium alkalinization are among the phenotypes exhibited by a null sltB mutant. Calcium homeostasis is an exception and this cation improves growth of sltΔ mutants. Moreover, loss of kinase HalA in conjunction with loss-of-function sltA or sltB mutations leads to pronounced calcium auxotrophy. sltA sltB double null mutants display a cation stress sensitive phenotype indistinguishable from that of single slt mutants showing the close functional relationship between these two proteins. This functional relationship is reinforced by the fact that numerous mutations in both slt loci can be isolated as suppressors of poor colonial growth resulting from certain null vps (vacuolar protein sorting) mutations. In addition to allowing identification of sltB, our sltB missense mutations enabled prediction of functional regions in the SltB protein. Although the relationship between the Slt and Vps pathways remains enigmatic, absence of SltB, like that of SltA, leads to vacuolar hypertrophy. Importantly, the phenotypes of selected sltA and sltB mutations demonstrate that suppression of null vps mutations is not dependent on the inability to tolerate cation stress. Thus a specific role for both SltA and SltB in the VPS pathway seems likely. Finally, it is noteworthy that SltA and SltB have a similar, limited phylogenetic distribution, being restricted to the pezizomycotina subphylum. The relevance of the Slt regulatory pathway to cell structure, intracellular trafficking and cation homeostasis and its restricted phylogenetic distribution makes this pathway of general interest for future investigation and as a source of targets for antifungal drugs.

Indexed as

Signal TransductionTranscription FactorsZinc FingersAllelesAmino Acid SequenceAspergillus nidulansCationsFungal ProteinsGene Expression Regulation, FungalGenetic LociMolecular Sequence DataMutationPhenotypePhylogenySequence AlignmentCationsFungal ProteinsTranscription FactorsCation-stress responseMutationpH regulationSignaling pathwaySuppressorVacuolar protein sorting

Identifiers

PMID26119498
PMCPMC4557415
OpenAlexW1900002559

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.