Evidence map›Paper›PMID 26119462›Full record

ArticleScientific reports2015

Quantifying the Antiviral Effect of IFN on HIV-1 Replication in Cell Culture.

Hiroki Ikeda, Ana Godinho-Santos, Sylvie Rato, Bénédicte Vanwalscappel, François Clavel, Kazuyuki Aihara, Shingo Iwami, Fabrizio Mammano

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Astrocyte Apoptosis and HIV Replication Are Modulated in Host Cells Coinfected withFrontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Hiroki IkedaDepartment of Biology, Kyushu University, Fukuoka 812-8581, Japan.
Ana Godinho-SantosINSERM, U941, Paris, France.
Sylvie RatoINSERM, U941, Paris, France.
Bénédicte Vanwalscappel1] INSERM, U941, Paris, France [2] Univ Paris Diderot, Sorbonne Paris Cité, IUH, Paris, France.
François Clavel1] INSERM, U941, Paris, France [2] Univ Paris Diderot, Sorbonne Paris Cité, IUH, Paris, France.
Kazuyuki Aihara1] Institute of Industrial Science, The University of Tokyo, Meguro-ku, Tokyo, Japan [2] Graduate School of Information Science and Technology, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Shingo Iwami1] Department of Biology, Kyushu University, Fukuoka 812-8581, Japan [2] PRESTO, JST, Kawaguchi, Saitama 3320012, Japan [3] CREST, JST, Kawaguchi, Saitama 3320012, Japan.
Fabrizio Mammano1] INSERM, U941, Paris, France [2] Univ Paris Diderot, Sorbonne Paris Cité, IUH, Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type-I interferons (IFNs) induce the expression of hundreds of cellular genes, some of which have direct antiviral activities. Although IFNs restrict different steps of HIV replication cycle, their dominant antiviral effect remains unclear. We first quantified the inhibition of HIV replication by IFN in tissue culture, using viruses with different tropism and growth kinetics. By combining experimental and mathematical analyses, we determined quantitative estimates for key parameters of HIV replication and inhibition, and demonstrate that IFN mainly inhibits de novo infection (33% and 47% for a X4- and a R5-strain, respectively), rather than virus production (15% and 6% for the X4 and R5 strains, respectively). This finding is in agreement with patient-derived data analyses.

Indexed as

Antiviral AgentsCell Culture TechniquesHEK293 CellsHIV-1HumansInterferon Type IModels, BiologicalVirus ReplicationAntiviral AgentsInterferon Type I

Identifiers

PMID26119462
PMCPMC4483772

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.