Evidence map›Paper›PMID 26117063›Full record

ReviewComparative biochemistry and physiology. Toxicology & pharmacology : CBP2015

Using Xenopus to discover new genes involved in branchiootorenal spectrum disorders.

Sally A Moody, Karen M Neilson, Kristy L Kenyon, Dominique Alfandari, Francesca Pignoni

Open access · greenAbstract readReview
In one paragraph

Review in Comparative biochemistry and physiology. Toxicology & pharmacology : CBP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. TheFrontiers in medicine · 2025
    Review
  4. Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genetic research progress in branchioZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Sally A MoodyDepartment of Anatomy and Regenerative Biology, George Washington University, School of Medicine and Health Sciences, Washington, DC, USA. Electronic address: samoody@gwu.edu.
Karen M NeilsonDepartment of Anatomy and Regenerative Biology, George Washington University, School of Medicine and Health Sciences, Washington, DC, USA.
Kristy L KenyonDepartment of Biology, Hobart and William Smith Colleges, Geneva, NY, USA.
Dominique AlfandariDepartment of Veterinary and Animal Sciences, University of Massachusetts Amherst, Amherst, MA, USA.
Francesca PignoniDepartment of Ophthalmology, Upstate Medical University, Syracuse, NY, USA.
George Washington University · USHobart and William Smith Colleges · USSUNY Upstate Medical University · USUniversity of Massachusetts Amherst · US

Funding

Mechanism of Xenopus Cranial Neural Crest Cell MigrationR01DE016289 · NIDCR · UNIVERSITY OF MASSACHUSETTS AMHERST · PI ALFANDARI, DOMINIQUE R · 2006 to 2022
$5.4M
GENETIC CONTROL OF EYE SPECIFICATIONR01EY013167 · NEI · UPSTATE MEDICAL UNIVERSITY · PI PIGNONI, FRANCESCA · 2000 to 2010
$2.9M
Gene Regulation of Cranial Sensory Placode DevelopmentR01DE022065 · NIDCR · GEORGE WASHINGTON UNIVERSITY · PI MOODY, SALLY ANN · 2011 to 2015
$1.7M
Novel Six1 co-factors and their role in placode developmentR03HD055321 · NICHD · GEORGE WASHINGTON UNIVERSITY · PI NEILSON, KAREN MARY · 2009 to 2010
$156k
NEI NIH HHS R01 EY013167NICHD NIH HHS R03 HD055321NICHD NIH HHS R03HD055321NIDCR NIH HHS R01 DE016289NIDCR NIH HHS R01 DE022065
6 · The paper itself

Abstract

Congenital hearing loss is an important clinical problem because, without early intervention, affected children do not properly acquire language and consequently have difficulties developing social skills. Although most newborns in the US are screened for hearing deficits, even earlier diagnosis can be made with prenatal genetic screening. Genetic screening that identifies the relevant mutated gene can also warn about potential congenital defects in organs not related to hearing. We will discuss efforts to identify new candidate genes that underlie the Branchiootorenal spectrum disorders in which affected children have hearing deficits and are also at risk for kidney defects. Mutations in two genes, SIX1 and EYA1, have been identified in about half of the patients tested. To uncover new candidate genes, we have used the aquatic animal model, Xenopus laevis, to identify genes that are part of the developmental genetic pathway of Six1 during otic and kidney development. We have already identified a large number of potential Six1 transcriptional targets and candidate co-factor proteins that are expressed at the right time and in the correct tissues to interact with Six1 during development. We discuss the advantages of using this system for gene discovery in a human congenital hearing loss syndrome.

Indexed as

AnimalsBranchio-Oto-Renal SyndromeHumansKidneyTranscription, GeneticXenopus2G4/Eb1BranchiootorenalEya1Mcsr1Six1SobpXenopusZmym2

Identifiers

PMID26117063
PMCPMC4662879
OpenAlexW779403920

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.