Evidence map›Paper›PMID 26116664›Full record

ArticleDevelopment (Cambridge, England)2015

Coco is a dual activity modulator of TGFβ signaling.

Alessia Deglincerti, Tomomi Haremaki, Aryeh Warmflash, Benoit Sorre, Ali H Brivanlou

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. TGF-β Family Signaling in Early Vertebrate Development.Cold Spring Harbor perspectives in biology · 2018
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Alessia DeglincertiLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, NY 10065, USA.
Tomomi HaremakiLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, NY 10065, USA.
Aryeh WarmflashLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, NY 10065, USA Laboratory of Theoretical Condensed Matter Physics, The Rockefeller University, New York, NY 10065, USA.
Benoit SorreLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, NY 10065, USA Laboratory of Theoretical Condensed Matter Physics, The Rockefeller University, New York, NY 10065, USA.
Ali H BrivanlouLaboratory of Stem Cell Biology and Molecular Embryology, The Rockefeller University, New York, NY 10065, USA brvnlou@rockefeller.edu.
Rockefeller University · USRice University · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Dynamic readout of TGFb signaling and modeling of cell fate specification in humaR01GM101653 · NIGMS · ROCKEFELLER UNIVERSITY · PI BRIVANLOU, ALI H, SIGGIA, ERIC D. · 2012 to 2020
$2.6M
NCI NIH HHS NIH/NCI P30CA16087NCI NIH HHS P30 CA016087NIGMS NIH HHS R01 GM101653NIGMS NIH HHS R01-GM101653
6 · The paper itself

Abstract

The TGFβ signaling pathway is a crucial regulator of developmental processes and disease. The activity of TGFβ ligands is modulated by various families of soluble inhibitors that interfere with the interactions between ligands and receptors. In an unbiased, genome-wide RNAi screen to identify genes involved in ligand-dependent signaling, we unexpectedly identified the BMP/Activin/Nodal inhibitor Coco as an enhancer of TGFβ1 signaling. Coco synergizes with TGFβ1 in both cell culture and Xenopus explants. Molecularly, Coco binds to TGFβ1 and enhances TGFβ1 binding to its receptor Alk5. Thus, Coco acts as both an inhibitor and an enhancer of signaling depending on the ligand it binds. This finding raises the need for a global reconsideration of the molecular mechanisms regulating TGFβ signaling.

Indexed as

AnimalsDNA PrimersFluorescent Antibody TechniqueImmunoprecipitationLuciferasesProtein Serine-Threonine KinasesReal-Time Polymerase Chain ReactionReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IReverse Transcriptase Polymerase Chain ReactionRNA InterferenceRNA, Small InterferingSignal TransductionTransforming Growth Factor beta1XenopusXenopus ProteinsDAND5 protein, XenopusDNA PrimersLuciferasesProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IRNA, Small InterferingTransforming Growth Factor beta1Xenopus ProteinsCocoDual-activity pathway modulatorsTGFβ signaling modulators

Identifiers

PMID26116664
PMCPMC4529031
OpenAlexW1917469393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.