Evidence map›Paper›PMID 26115720›Full record

ArticleJournal of assisted reproduction and genetics2015

Reference gene selection for real-time quantitative PCR analysis on ovarian cryopreservation by vitrification in mice.

Shan Yuanyuan, Su Qin, Xu Rongrong, Gao Yujing, Pei Chengbin, Ma Jianjun, Yang Yanzhou, Pei Xiuying

Open access · bronzeAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shan YuanyuanKey Laboratory of Fertility Preservation and Maintenance of Ministry of Education, Key Laboratory of Reproduction and Genetics in Ningxia, Department of Biochemistry and Molecular Biology, Ningxia Medical University, Yinchuan, Ningxia, 75004, People's Republic of China.
Su Qin
Xu Rongrong
Gao Yujing
Pei Chengbin
Ma Jianjun
Yang Yanzhou
Pei Xiuying
Ningxia Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo ensure the correct interpretation of the results of quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR) from ovarian tissue cryopreserved by vitrification, it is critical to normalize expression levels to a reference gene with stable messenger RNA (mRNA) expression in the vitrified/warmed ovarian tissue. The aim of this work was to identify suitable reference genes for qRT-PCR analysis during ovarian cryopreservation by vitrification.

methodsGeNorm, NormFinder, comparative Delta-CT, and BestKeeper were used to analyze the expression and stability of the 14 reference genes GAPDH, ABL1, ACTB, CDKN1A, GPER, GUSB, HPRT1, HSP90AB1, IPO8, PPIA, RPL4, RPL30, TBP, and UPAR.

resultsOur results indicated that ACTB and RPL4 were relatively stable reference genes in vitrified/warmed ovaries.

Indexed as

ActinsAnimalsCryopreservationFemaleGene Expression ProfilingMice, Inbred C57BLOvaryReal-Time Polymerase Chain ReactionReference StandardsRibosomal ProteinsVitrificationActinsribosomal protein L4ribosomal protein L4, mouseRibosomal Proteins

Identifiers

PMID26115720
PMCPMC4554379
OpenAlexW759841485

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.