Evidence map›Paper›PMID 26114571›Full record

ArticlePLoS pathogens2015

Fungal Morphology, Iron Homeostasis, and Lipid Metabolism Regulated by a GATA Transcription Factor in Blastomyces dermatitidis.

Amber J Marty, Aimee T Broman, Robert Zarnowski, Teigan G Dwyer, Laura M Bond, Anissa Lounes-Hadj Sahraoui, Joël Fontaine, James M Ntambi, Sündüz Keleş, Christina Kendziorski and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Amber J MartyDepartment of Medicine, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Aimee T BromanDepartment of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Robert ZarnowskiDepartment of Medicine, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Teigan G DwyerDepartment of Medicine, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Laura M BondDepartment of Biochemistry, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Anissa Lounes-Hadj SahraouiUniversité du Littoral Côte d'Opale, Unité de Chimie Environnementale et Interactions sur le Vivant, Calais, France.
Joël FontaineUniversité du Littoral Côte d'Opale, Unité de Chimie Environnementale et Interactions sur le Vivant, Calais, France.
James M NtambiDepartment of Biochemistry, Department of Nutritional Sciences, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Sündüz KeleşDepartment of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Madison, Wisconsin, United States of America; Department of Statistics, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Christina KendziorskiDepartment of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
Gregory M GauthierDepartment of Medicine, University of Wisconsin, Madison, Madison, Wisconsin, United States of America.
University of Wisconsin–Madison · USUniversité du littoral côte d'opale · FR

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Statistical Methods for the Analysis of ChlP-chip DataR01HG003747 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI KELES, SUNDUZ · 2007 to 2024
$4.8M
Molecular Mechanisms that Regulate Phase Transition in Dimorphic FungiK08AI071004 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI GAUTHIER, GREGORY M · 2006 to 2010
$705k
Regulation of Morphogenesis in Dimorphic Fungi by a GATA Transcription FactorR21AI105537 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI GAUTHIER, GREGORY M · 2014 to 2015
$414k
NCATS NIH HHS UL1 TR000427NCATS NIH HHS UL1TR000427NHGRI NIH HHS R01 HG003747NIAID NIH HHS 1R21AI105537NIAID NIH HHS 5K08AI071004NIAID NIH HHS K08 AI071004NIAID NIH HHS K08AI071004-04S1NIAID NIH HHS R21 AI105537NIGMS NIH HHS T32 GM007215NIGMS NIH HHS T32 GM07215
6 · The paper itself

Abstract

In response to temperature, Blastomyces dermatitidis converts between yeast and mold forms. Knowledge of the mechanism(s) underlying this response to temperature remains limited. In B. dermatitidis, we identified a GATA transcription factor, SREB, important for the transition to mold. Null mutants (SREBΔ) fail to fully complete the conversion to mold and cannot properly regulate siderophore biosynthesis. To capture the transcriptional response regulated by SREB early in the phase transition (0-48 hours), gene expression microarrays were used to compare SREB∆ to an isogenic wild type isolate. Analysis of the time course microarray data demonstrated SREB functioned as a transcriptional regulator at 37°C and 22°C. Bioinformatic and biochemical analyses indicated SREB was involved in diverse biological processes including iron homeostasis, biosynthesis of triacylglycerol and ergosterol, and lipid droplet formation. Integration of microarray data, bioinformatics, and chromatin immunoprecipitation identified a subset of genes directly bound and regulated by SREB in vivo in yeast (37°C) and during the phase transition to mold (22°C). This included genes involved with siderophore biosynthesis and uptake, iron homeostasis, and genes unrelated to iron assimilation. Functional analysis suggested that lipid droplets were actively metabolized during the phase transition and lipid metabolism may contribute to filamentous growth at 22°C. Chromatin immunoprecipitation, RNA interference, and overexpression analyses suggested that SREB was in a negative regulatory circuit with the bZIP transcription factor encoded by HAPX. Both SREB and HAPX affected morphogenesis at 22°C; however, large changes in transcript abundance by gene deletion for SREB or strong overexpression for HAPX were required to alter the phase transition.

Indexed as

BlastomycesFungiGATA Transcription FactorsGene Expression Regulation, FungalGenes, FungalHomeostasisIronLipid MetabolismGATA Transcription FactorsIron

Identifiers

PMID26114571
PMCPMC4482641
OpenAlexW1760810650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.