ArticlePloS one2015
De Novo Regulatory Motif Discovery Identifies Significant Motifs in Promoters of Five Classes of Plant Dehydrin Genes.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Cryometamorphosis expression patterns of fruiting body development in the mushroom-forming fungusIMA fungus · 2026Article
- Comparative Analysis of Dehydrins from Woody Plant Species.Biomolecules · 2024Article
- Research progress on the physiological response and molecular mechanism of cold response in plants.Frontiers in plant science · 2024Review
- Dehydrin CaDHN2 Enhances Drought Tolerance by Affecting Ascorbic Acid Synthesis under Drought in Peppers.Plants (Basel, Switzerland) · 2023Article
- The chloroplast redox-responsive transcriptome of solanaceous plants reveals significant nuclear gene regulatory motifs associated to stress acclimation.Plant molecular biology · 2022Article
- Plant Dehydrins: Expression, Regulatory Networks, and Protective Roles in Plants Challenged by Abiotic Stress.International journal of molecular sciences · 2021Review
- Tuning promoter boundaries improves regulatory motif discovery in nonmodel plants: the peach example.Plant physiology · 2021Article
- Temperature and Light-Quality-Dependent Regulation of Freezing Tolerance in Barley.Plants (Basel, Switzerland) · 2020Article
- Identification and Functional Characterization of a Soybean (Plants (Basel, Switzerland) · 2019Article
- Article
- Contrasting Effects of WildFrontiers in plant science · 2019Article
- Structural and Functional Dynamics of Dehydrins: A Plant Protector Protein under Abiotic Stress.International journal of molecular sciences · 2018Review
- The nitrogen responsive transcriptome in potato (Solanum tuberosum L.) reveals significant gene regulatory motifs.Scientific reports · 2016Article
- Extensive Transcriptome Changes During Natural Onset and Release of Vegetative Bud Dormancy in Populus.Frontiers in plant science · 2015Article
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2 authors.
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Abstract
Plants accumulate dehydrins in response to osmotic stresses. Dehydrins are divided into five different classes, which are thought to be regulated in different manners. To better understand differences in transcriptional regulation of the five dehydrin classes, de novo motif discovery was performed on 350 dehydrin promoter sequences from a total of 51 plant genomes. Overrepresented motifs were identified in the promoters of five dehydrin classes. The Kn dehydrin promoters contain motifs linked with meristem specific expression, as well as motifs linked with cold/dehydration and abscisic acid response. KS dehydrin promoters contain a motif with a GATA core. SKn and YnSKn dehydrin promoters contain motifs that match elements connected with cold/dehydration, abscisic acid and light response. YnKn dehydrin promoters contain motifs that match abscisic acid and light response elements, but not cold/dehydration response elements. Conserved promoter motifs are present in the dehydrin classes and across different plant lineages, indicating that dehydrin gene regulation is likely also conserved.
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