Evidence map›Paper›PMID 26114229›Full record

SynthesisJournal of affective disorders2015

Genome-wide association study of posttraumatic stress disorder in a cohort of Iraq-Afghanistan era veterans.

Allison E Ashley-Koch, Melanie E Garrett, Jason Gibson, Yutao Liu, Michelle F Dennis, Nathan A Kimbrel, Veterans Affairs Mid-Atlantic Mental Illness Research, Education, and Clinical Center Workgroup, Jean C Beckham, Michael A Hauser

Abstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in Journal of affective disorders, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 3 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 3 syntheses or guidelines pooled it, 95 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Brain-Derived Neurotropic FactorBioMed research international · 2017
    Trial
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  8. Review
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  14. Review
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  16. TheJournal of neurogenetics · 2021
    Article
  17. PTSD: Past, present and future implications for China.Chinese journal of traumatology = Zhonghua chuang shang za zhi · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Allison E Ashley-KochDepartment of Medicine, Duke University Medical Center, Durham, NC, United States. Electronic address: allison.ashleykoch@duke.edu.
Melanie E GarrettDepartment of Medicine, Duke University Medical Center, Durham, NC, United States.
Jason GibsonDepartment of Medicine, Duke University Medical Center, Durham, NC, United States.
Yutao LiuDepartment of Medicine, Duke University Medical Center, Durham, NC, United States.
Michelle F DennisDurham Veterans Affairs Medical Center, Durham, NC, United States; The VA Mid-Atlantic Mental Illness Research, Education, and Clinical Center, Durham, NC, United States; Department of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, NC, United States.
Nathan A KimbrelDurham Veterans Affairs Medical Center, Durham, NC, United States; The VA Mid-Atlantic Mental Illness Research, Education, and Clinical Center, Durham, NC, United States; Department of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, NC, United States.
Veterans Affairs Mid-Atlantic Mental Illness Research, Education, and Clinical Center Workgroup
Jean C BeckhamDurham Veterans Affairs Medical Center, Durham, NC, United States; The VA Mid-Atlantic Mental Illness Research, Education, and Clinical Center, Durham, NC, United States; Department of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, NC, United States.
Michael A HauserDepartment of Medicine, Duke University Medical Center, Durham, NC, United States.
Duke Medical Center · USDuke University Hospital · US

Funding

Gene x Environment Effects on PTSDIK2CX000525 · VA · OLIN TEAGUE VETERANS CENTER · PI KIMBREL, NATHAN A. · 2012 to 2016
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CSRD VA IK2 CX000525
6 · The paper itself

Abstract

backgroundPosttraumatic stress disorder (PTSD) is a psychiatric disorder that can develop after experiencing traumatic events. A genome-wide association study (GWAS) design was used to identify genetic risk factors for PTSD within a multi-racial sample primarily composed of U.S. veterans.

methodsParticipants were recruited at multiple medical centers, and structured interviews were used to establish diagnoses. Genotypes were generated using three Illumina platforms and imputed with global reference data to create a common set of SNPs. SNPs that increased risk for PTSD were identified with logistic regression, while controlling for gender, trauma severity, and population substructure. Analyses were run separately in non-Hispanic black (NHB; n = 949) and non-Hispanic white (NHW; n = 759) participants. Meta-analysis was used to combine results from the two subsets.

resultsSNPs within several interesting candidate genes were nominally significant. Within the NHB subset, the most significant genes were UNC13C and DSCAM. Within the NHW subset, the most significant genes were TBC1D2, SDC2 and PCDH7. In addition, PRKG1 and DDX60L were identified through meta-analysis. The top genes for the three analyses have been previously implicated in neurologic processes consistent with a role in PTSD. Pathway analysis of the top genes identified alternative splicing as the top GO term in all three analyses (FDR q < 3.5 × 10(-5)). LIMITATIONS: No individual SNPs met genome-wide significance in the analyses.

conclusionsThis multi-racial PTSD GWAS identified biologically plausible candidate genes and suggests that post-transcriptional regulation may be important to the pathology of PTSD; however, replication of these findings is needed.

Indexed as

Afghan Campaign 2001-Genome-Wide Association StudyIraq War, 2003-2011AdultAlternative SplicingBlack or African AmericanCohort StudiesFemaleGenetic Predisposition to DiseaseGenotypeHumansMalePolymorphism, Single NucleotideStress Disorders, Post-TraumaticUnited StatesVeteransCombat exposureGene*environment interactionGenome-wide association studyMeta-analysisPosttraumatic stress disorder

Identifiers

PMID26114229
PMCPMC4697755
OpenAlexW2170165469

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.