Evidence map›Paper›PMID 26114034›Full record

ArticleBiomedical optics express2015

Mapping conduction velocity of early embryonic hearts with a robust fitting algorithm.

Shi Gu, Yves T Wang, Pei Ma, Andreas A Werdich, Andrew M Rollins, Michael W Jenkins

Abstract read
In one paragraph

Article in Biomedical optics express, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Optical Electrophysiology in the Developing Heart.Journal of cardiovascular development and disease · 2018
    Review
  7. A review of optical pacing with infrared light.Journal of neural engineering · 2018
    Review
  8. Article
  9. Article
  10. Probing the Electrophysiology of the Developing Heart.Journal of cardiovascular development and disease · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shi GuDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
Yves T WangDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA ; Department of Pediatrics, Case Western Reserve University, Cleveland, OH, 44016, USA.
Pei MaDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
Andreas A WerdichCardiovascular Division, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Andrew M RollinsDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
Michael W JenkinsDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA ; Department of Pediatrics, Case Western Reserve University, Cleveland, OH, 44016, USA.

Funding

OCT Imaging Technology for Developmental Cardiology ResearchR01HL083048 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI ROLLINS, ANDREW MARTIN · 2006 to 2016
$3.2M
Investigating the Early Embryonic Murine Heart Using Optical Coherence TomographyR01HL095717 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI ROLLINS, ANDREW MARTIN · 2009 to 2012
$3.0M
Molecular Mechanisms of Stretch-Induced Electrical Remodeling in the HeartR00HL112724 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WERDICH, ANDREAS AUGUSTINUS · 2015 to 2018
$747k
Optical pacing of the embryonic heartR21HL115373 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI JENKINS, MICHAEL W. · 2012 to 2013
$422k
Molecular Mechanisms of Stretch-Induced Electrical Remodeling in the HeartK99HL112724 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WERDICH, ANDREAS AUGUSTINUS · 2012 to 2013
$265k
NHLBI NIH HHS K99 HL112724NHLBI NIH HHS R00 HL112724NHLBI NIH HHS R01 HL083048NHLBI NIH HHS R01 HL095717NHLBI NIH HHS R21 HL115373
6 · The paper itself

Abstract

Cardiac conduction maturation is an important and integral component of heart development. Optical mapping with voltage-sensitive dyes allows sensitive measurements of electrophysiological signals over the entire heart. However, accurate measurements of conduction velocity during early cardiac development is typically hindered by low signal-to-noise ratio (SNR) measurements of action potentials. Here, we present a novel image processing approach based on least squares optimizations, which enables high-resolution, low-noise conduction velocity mapping of smaller tubular hearts. First, the action potential trace measured at each pixel is fit to a curve consisting of two cumulative normal distribution functions. Then, the activation time at each pixel is determined based on the fit, and the spatial gradient of activation time is determined with a two-dimensional (2D) linear fit over a square-shaped window. The size of the window is adaptively enlarged until the gradients can be determined within a preset precision. Finally, the conduction velocity is calculated based on the activation time gradient, and further corrected for three-dimensional (3D) geometry that can be obtained by optical coherence tomography (OCT). We validated the approach using published activation potential traces based on computer simulations. We further validated the method by adding artificially generated noise to the signal to simulate various SNR conditions using a curved simulated image (digital phantom) that resembles a tubular heart. This method proved to be robust, even at very low SNR conditions (SNR = 2-5). We also established an empirical equation to estimate the maximum conduction velocity that can be accurately measured under different conditions (e.g. sampling rate, SNR, and pixel size). Finally, we demonstrated high-resolution conduction velocity maps of the quail embryonic heart at a looping stage of development.

Indexed as

(100.2960) Image analysis(170.2655) Functional monitoring and imaging

Identifiers

PMID26114034
PMCPMC4473749

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.