Evidence map›Paper›PMID 26113807›Full record

ArticleFrontiers in neuroscience2015

Robust estimation of group-wise cortical correspondence with an application to macaque and human neuroimaging studies.

Ilwoo Lyu, Sun H Kim, Joon-Kyung Seong, Sang W Yoo, Alan Evans, Yundi Shi, Mar Sanchez, Marc Niethammer, Martin A Styner

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Statistical shape analysis of the tricuspid valve in hypoplastic left heart sydrome.Statistical atlases and computational models of the heart. STACOM (Workshop) · 2022
    Article
  4. Article
  5. Establishing Surface Correspondence for Post-surgical Cortical Thickness Changes in Temporal Lobe Epilepsy.Proceedings of SPIE--the International Society for Optical Engineering · 2021
    Article
  6. Validation of Group-wise Registration for Surface-based Functional MRI Analysis.Proceedings of SPIE--the International Society for Optical Engineering · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Hierarchical Spherical Deformation for Shape Correspondence.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2018
    Article
  11. SlicerSALT: Shape AnaLysis Toolbox.Shape in medical imaging : International Workshop, ShapeMI 2018, held in conjunction with MICCAI 2018, Granada, Spain, September 20, 2018 : proceedings. ShapeMI (Workshop) (2018 : Granada, Spain) · 2018
    Article
  12. Article
  13. Article
  14. Group-wise Shape Correspondence of Variable and Complex Objects.Proceedings of SPIE--the International Society for Optical Engineering · 2018
    Article
  15. Constructing Statistically Unbiased Cortical Surface Templates Using Feature-Space Covariance.Proceedings of SPIE--the International Society for Optical Engineering · 2018
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ilwoo LyuDepartment of Computer Science, University of North Carolina Chapel Hill, NC, USA.
Sun H KimDepartment of Psychiatry, University of North Carolina Chapel Hill, NC, USA.
Joon-Kyung SeongDepartment of Biomedical Engineering, Korea University Seoul, South Korea.
Sang W YooR&D Team, Health and Medical Equipment Business, Samsung Electronics Suwon, South Korea.
Alan EvansMontreal Neurological Institute, McGill University Montreal, QC, Canada.
Yundi ShiDepartment of Psychiatry, University of North Carolina Chapel Hill, NC, USA.
Mar SanchezDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, Emory university Atlanta, GA, USA.
Marc NiethammerDepartment of Computer Science, University of North Carolina Chapel Hill, NC, USA ; Biomedical Research Imaging Center, University of North Carolina Chapel Hill, NC, USA.
Martin A StynerDepartment of Computer Science, University of North Carolina Chapel Hill, NC, USA ; Department of Psychiatry, University of North Carolina Chapel Hill, NC, USA.

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Cellular and molecular mechanisms governing cortical surface area overgrowth in iPSC-derived neural cells from longitudinally characterized individuals with autismR01HD055741 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Joseph Piven · 2007 to 2026
$52.6M
Washington University ConsoritumU54EB005149 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI KIKINIS, RON · 2004 to 2013
$39.3M
UNC MRDD Research CenterP30HD003110 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BELGER, AYSENIL · 1985 to 2012
$28.7M
The ontogeny of social vocal engagement and its derailment in autismP50MH100029 · NIMH · EMORY UNIVERSITY · PI RAMSAY, GORDON JAMES · 2012 to 2021
$20.1M
Project 3: The neurobiology of adverse early care in rhesus infants....P50MH078105 · NIMH · UNIVERSITY OF MINNESOTA · PI GUNNAR, MEGAN R · 2009 to 2013
$9.9M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BELGER, AYSENIL · 2013 to 2019
$8.0M
Developmental Brain Atlas Tools and Data Applied to Humans and MacaquesR01MH091645 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NIETHAMMER, MARC, STYNER, MARTIN ANDREAS · 2010 to 2014
$2.1M
NIBIB NIH HHS U54 EB005149NICHD NIH HHS P30 HD003110NICHD NIH HHS R01 HD055741NICHD NIH HHS U54 HD079124NIH HHS P51 OD011132NIMH NIH HHS P50 MH078105NIMH NIH HHS P50 MH100029NIMH NIH HHS R01 MH091645
6 · The paper itself

Abstract

We present a novel group-wise registration method for cortical correspondence for local cortical thickness analysis in human and non-human primate neuroimaging studies. The proposed method is based on our earlier template based registration that estimates a continuous, smooth deformation field via sulcal curve-constrained registration employing spherical harmonic decomposition of the deformation field. This pairwise registration though results in a well-known template selection bias, which we aim to overcome here via a group-wise approach. We propose the use of an unbiased ensemble entropy minimization following the use of the pairwise registration as an initialization. An individual deformation field is then iteratively updated onto the unbiased average. For the optimization, we use metrics specific for cortical correspondence though all of these are straightforwardly extendable to the generic setting: The first focused on optimizing the correspondence of automatically extracted sulcal landmarks and the second on that of sulcal depth property maps. We further propose a robust entropy metric and a hierarchical optimization by employing spherical harmonic basis orthogonality. We also provide the detailed methodological description of both our earlier work and the proposed method with a set of experiments on a population of human and non-human primate subjects. In the experiment, we have shown that our method achieves superior results on consistency through quantitative and visual comparisons as compared to the existing methods.

Indexed as

cortical surfaceentropy minimizationgroup-wise registrationspherical harmonicssulcal curvesurface registration

Identifiers

PMID26113807
PMCPMC4462677

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.