Evidence map›Paper›PMID 26113641›Full record

ArticleScience (New York, N.Y.)2015

Circadian rhythms. A protein fold switch joins the circadian oscillator to clock output in cyanobacteria.

Yong-Gang Chang, Susan E Cohen, Connie Phong, William K Myers, Yong-Ick Kim, Roger Tseng, Jenny Lin, Li Zhang, Joseph S Boyd, Yvonne Lee and 7 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 1 synthesis or guideline pooled it, 210 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Fold-Switching Proteins.Annual review of biophysics · 2026
    Review
  13. The Phenotypic Landscape of a Circadian Clock.bioRxiv : the preprint server for biology · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Circadian clock proteins KaiB and Rbp2 ofMicrobiology spectrum · 2026
    Article
  18. Article
  19. Article
  20. Article

78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Yong-Gang ChangSchool of Natural Sciences, University of California, Merced, CA 95343, USA.
Susan E CohenCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093, USA.
Connie PhongDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA.
William K MyersDepartment of Chemistry, University of California, Davis, CA 95616, USA.
Yong-Ick KimCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093, USA.
Roger TsengSchool of Natural Sciences, University of California, Merced, CA 95343, USA. Quantitative and Systems Biology, University of California, Merced, CA 95343, USA.
Jenny LinDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA.
Li ZhangSchool of Natural Sciences, University of California, Merced, CA 95343, USA.
Joseph S BoydCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093, USA.
Yvonne LeeDivision of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Shannon KangDivision of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
David LeeDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.
Sheng LiDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.
R David BrittDepartment of Chemistry, University of California, Davis, CA 95616, USA.
Michael J RustDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA.
Susan S GoldenCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093, USA. Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Andy LiWangSchool of Natural Sciences, University of California, Merced, CA 95343, USA. Center for Circadian Biology, University of California, San Diego, La Jolla, CA 92093, USA. Quantitative and Systems Biology, University of California, Merced, CA 95343, USA. Chemistry and Chemical Biology, University of California, Merced, CA 95343, USA. Health Sciences Research Institute, University of California, Merced, CA 95343, USA. aliwang@ucmerced.edu.
University of California, San Diego · USUniversity of California, Merced · USUniversity of Chicago · USUniversity of California, Davis · US

Funding

Mechanism of receptor-mediated entry and infection by filovirusesR01AI101436 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CHANDRAN, KARTIK · 2012 to 2016
$4.0M
THE PATHWAY THAT SETS THE CYANOBACTERIAL CIRCADIAN CLOCKR01GM062419 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOLDEN, SUSAN S · 2001 to 2015
$3.9M
The Linchpin that Joins the Circadian Oscillator to Clock OutputR01GM107521 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI LIWANG, ANDY · 2014 to 2021
$2.8M
STRUCTURE DRIVEN ANALYSIS OF EBOLA VIRUS RECEPTOR BINDING SITER01AI081982 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI SAPHIRE, ERICA OLLMANN · 2010 to 2014
$2.8M
Circadian gating of cell division by the cyanobacterial oscillatorR01GM100116 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOLDEN, SUSAN S, POGLIANO, JOSEPH A · 2012 to 2015
$1.5M
Coupling between Circadian Rhythms and Metaboilsm in CyanobacteriaR01GM107369 · NIGMS · UNIVERSITY OF CHICAGO · PI RUST, MICHAEL · 2013 to 2017
$1.5M
NIAID NIH HHS AI081982NIAID NIH HHS AI101436NIAID NIH HHS R01 AI081982NIAID NIH HHS R01 AI101436NIGMS NIH HHS GM062419NIGMS NIH HHS GM100116NIGMS NIH HHS GM107521NIGMS NIH HHS R01 GM062419NIGMS NIH HHS R01 GM100116NIGMS NIH HHS R01 GM107369NIGMS NIH HHS R01 GM107521Wellcome Trust
6 · The paper itself

Abstract

Organisms are adapted to the relentless cycles of day and night, because they evolved timekeeping systems called circadian clocks, which regulate biological activities with ~24-hour rhythms. The clock of cyanobacteria is driven by a three-protein oscillator composed of KaiA, KaiB, and KaiC, which together generate a circadian rhythm of KaiC phosphorylation. We show that KaiB flips between two distinct three-dimensional folds, and its rare transition to an active state provides a time delay that is required to match the timing of the oscillator to that of Earth's rotation. Once KaiB switches folds, it binds phosphorylated KaiC and captures KaiA, which initiates a phase transition of the circadian cycle, and it regulates components of the clock-output pathway, which provides the link that joins the timekeeping and signaling functions of the oscillator.

Indexed as

Circadian RhythmBacterial ProteinsCircadian Rhythm Signaling Peptides and ProteinsPhosphorylationProtein FoldingProtein Structure, SecondarySynechococcusBacterial ProteinsCircadian Rhythm Signaling Peptides and ProteinsKaiA protein, cyanobacteriaKaiB protein, cyanobacteriaKaiC protein, cyanobacteria

Identifiers

PMID26113641
PMCPMC4506712
OpenAlexW1550289833

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.