Evidence map›Paper›PMID 26113134›Full record

ArticleBMC research notes2015

Truncating mutation in intracellular phospholipase A₁ gene (DDHD2) in hereditary spastic paraplegia with intellectual disability (SPG54).

Nuha Alrayes, Hussein Sheikh Ali Mohamoud, Musharraf Jelani, Saleem Ahmad, Nirmal Vadgama, Khadijah Bakur, Michael Simpson, Jumana Yousuf Al-Aama, Jamal Nasir

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. DDHD2 possesses both lipase and transacylase capacities that remodel triglyceride acyl chains.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  7. Lipids and Secretory Vesicle Exocytosis.Advances in neurobiology · 2023
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  9. Loss ofInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Nuha AlrayesPrincess Al-Jawhara Albrahim Center of Excellence in Research of Hereditary Disorders, King Abdulaziz University, Jeddah, 80205, Kingdom of Saudi Arabia. nuharayes@gmail.com.
Hussein Sheikh Ali MohamoudPrincess Al-Jawhara Albrahim Center of Excellence in Research of Hereditary Disorders, King Abdulaziz University, Jeddah, 80205, Kingdom of Saudi Arabia. husseinsheekh@yahoo.co.uk.
Musharraf JelaniPrincess Al-Jawhara Albrahim Center of Excellence in Research of Hereditary Disorders, King Abdulaziz University, Jeddah, 80205, Kingdom of Saudi Arabia. musharraf_jelani@yahoo.com.
Saleem AhmadDepartment of Genetic Medicine, Faculty of Medicine, King Abdulaziz University, Jeddah, Kingdom of Saudi Arabia. sahmad@yahoo.com.
Nirmal VadgamaDivision of Biomedical Sciences (BMS), Human Genetics Research Center, St. George's University of London (SGUL), London, SW17 0RE, UK. nvadgama@sgul.ac.uk.
Khadijah BakurPrincess Al-Jawhara Albrahim Center of Excellence in Research of Hereditary Disorders, King Abdulaziz University, Jeddah, 80205, Kingdom of Saudi Arabia. kbakur@yahoo.com.
Michael SimpsonGenetics and Molecular Medicine, King's College London, Guy's Hospital, London, SE1 9RT, UK. michael.simpson@kcl.ac.uk.
Jumana Yousuf Al-AamaPrincess Al-Jawhara Albrahim Center of Excellence in Research of Hereditary Disorders, King Abdulaziz University, Jeddah, 80205, Kingdom of Saudi Arabia. al-aama@yahoo.com.
Jamal NasirDivision of Biomedical Sciences (BMS), Human Genetics Research Center, St. George's University of London (SGUL), London, SW17 0RE, UK. p1106394@sgul.ac.uk.
King Abdulaziz University · SASt George's, University of London · GBGuy's Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHereditary spastic paraplegias (HSP), a group of genetically heterogeneous neurological disorders with more than 56 documented loci (SPG1-56), are described either as uncomplicated (or pure), or complicated where in addition to spasticity and weakness of lower extremeties, additional neurological symptoms are present, including dementia, loss of vision, epilepsy, mental retardation and ichthyosis. We identified a large consanguineous family of Indian descent with four affected members with childhood onset HSP (SPG54), presenting with upper and lower limb spasticity, mental retardation and agenesis of the corpus callosum.

resultsA common region of homozygosity on chromosome 8 spanning seven megabases (Mb) was identified in the affected individuals using the Illumina human cytoSNP-12 DNA Analysis BeadChip Kit. Exome sequencing identified a homozygous stop gain mutation (pR287X) in the phospholipase A1 gene DDHD2, in the affected individuals, resulting in a premature stop codon and a severely truncated protein lacking the SAM and DDHD domains crucial for phosphoinositide binding and phospholipase activity.

conclusionThis mutation adds to the knowledge of HSP, suggests a possible founder effect for the pR287X mutation, and adds to the list of genes involved in lipid metabolism with a role in HSP and other neurodegenerative disorders.

Indexed as

Codon, NonsenseMutationAgenesis of Corpus CallosumBase SequenceBone and BonesChild, PreschoolChromosomes, Human, Pair 8ConsanguinityDNA Mutational AnalysisExomeFemaleHomozygoteHumansInfantIntellectual DisabilityLipid MetabolismCodon, NonsenseDDHD2 protein, humanPhospholipases

Identifiers

PMID26113134
PMCPMC4482296
OpenAlexW1588036175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.