Evidence map›Paper›PMID 26112892›Full record

ArticleMolecular and biochemical parasitology2015

Biochemical characterization of FIKK8--A unique protein kinase from the malaria parasite Plasmodium falciparum and other apicomplexans.

Khan T Osman, Hua Jane Lou, Wei Qiu, Verena Brand, Aled M Edwards, Benjamin E Turk, Raymond Hui

Open access · hybridAbstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Khan T OsmanDept of Molecular Genetics, University of Toronto, Canada; Structural Genomics Consortium, University of Toronto, Canada.
Hua Jane LouDept of Pharmacology, Yale University, United States.
Wei QiuStructural Genomics Consortium, University of Toronto, Canada.
Verena BrandHospital for Sick Children, Canada.
Aled M EdwardsDept of Molecular Genetics, University of Toronto, Canada; Structural Genomics Consortium, University of Toronto, Canada.
Benjamin E TurkDept of Pharmacology, Yale University, United States.
Raymond HuiStructural Genomics Consortium, University of Toronto, Canada; Toronto General Hospital Research Institute, Canada. Electronic address: raymond.hui@utoronto.ca.
Structural Genomics Consortium · CAUniversity of Toronto · CAYale University · USHospital for Sick Children · CA

Funding

Modeling human phosphorylation networks through kinome-wide profilingR01GM104047 · NIGMS · YALE UNIVERSITY · PI TURK, BENJAMIN E, YAFFE, MICHAEL B · 2013 to 2017
$2.4M
Canadian Institutes of Health ResearchNIGMS NIH HHS R01 GM104047Wellcome Trust 092809/Z/10/Z
6 · The paper itself

Abstract

FIKKs are protein kinases with distinctive sequence motifs found exclusively in Apicomplexa. Here, we report on the biochemical characterization of Plasmodium falciparum FIKK8 (PfFIKK8) and its Cryptosporidium parvum orthologue (CpFIKK) - the only member of the family predicted to be cytosolic and conserved amongst non-Plasmodium parasites. Recombinant protein samples of both were catalytically active. We characterized their phosphorylation ability using an enzymatic assay and substrate specificities using an arrayed positional scanning peptide library. Our results show that FIKK8 targets serine, preferably with arginine in the +3 and -3 positions. Furthermore, the soluble and active FIKK constructs in our experiments contained an N-terminal extension (NTE) conserved in FIKK8 orthologues from other apicomplexan species. Based on our results, we propose that this NTE is an integral feature of the FIKK subfamily.

Indexed as

Cryptosporidium parvumPhosphorylationPlasmodium falciparumProtein KinasesProtein Processing, Post-TranslationalRecombinant ProteinsSerineSubstrate SpecificityProtein KinasesRecombinant ProteinsSerineApicomplexaCryptosporidiumFIKK kinaseKinase

Identifiers

PMID26112892
PMCPMC4576209
OpenAlexW827712333

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.