Evidence map›Paper›PMID 26112833›Full record

ArticleParasites & vectors2015

Ubiquitin-specific proteases are differentially expressed throughout the Schistosoma mansoni life cycle.

Roberta V Pereira, Matheus de S Gomes, Roenick P Olmo, Daniel M Souza, Fernanda J Cabral, Liana K Jannotti-Passos, Elio H Baba, Andressa B P Andreolli, Vanderlei Rodrigues, William Castro-Borges and 1 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. The emerging role of Deubiquitinases (DUBs) in parasites: A foresight review.Frontiers in cellular and infection microbiology · 2022
    Review
  7. Annals of translational medicine · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Roberta V PereiraNúcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Morro do Cruzeiro, Ouro Preto, MG, Brasil. robertaverciano@yahoo.com.br.
Matheus de S GomesInstituto de Genética e Bioquímica, Universidade Federal de Uberlândia, Patos de Minas, MG, Brasil. matheus@ingeb.ufu.br.
Roenick P OlmoNúcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Morro do Cruzeiro, Ouro Preto, MG, Brasil. roenick@gmail.com.
Daniel M SouzaNúcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Morro do Cruzeiro, Ouro Preto, MG, Brasil. daniel.ufop@gmail.com.
Fernanda J CabralDepartamento de Fisiologia, Instituto de Ciências Biomédicas, Butantã, SP, Brasil. fjanku@yahoo.com.br.
Liana K Jannotti-PassosCentro de Pesquisas René Rachou, Fiocruz, Belo Horizonte, MG, Brasil. passoslk@cpqrr.fiocruz.br.
Elio H BabaCentro de Pesquisas René Rachou, Fiocruz, Belo Horizonte, MG, Brasil. elio.baba@cpqrr.fiocruz.br.
Andressa B P AndreolliFaculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, São Paulo, Brasil. andressapbamonografia@gmail.com.
Vanderlei RodriguesFaculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, São Paulo, Brasil. vanderlei.rodrigues6@hotmail.com.
William Castro-BorgesNúcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Morro do Cruzeiro, Ouro Preto, MG, Brasil. wborges@iceb.ufop.br.
Renata Guerra-SáNúcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Morro do Cruzeiro, Ouro Preto, MG, Brasil. rguerra@iceb.ufop.br.
Universidade Federal de Ouro Preto · BRFundação Oswaldo Cruz · BRUniversidade de São Paulo · BRInstituto Butantan · BRUniversidade Federal de Uberlândia · BR

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundThe ubiquitination process can be reversed by deubiquitinating enzymes (DUBs). These proteases are involved in ubiquitin processing, in the recovery of modified ubiquitin trapped in inactive forms, and in the recycling of ubiquitin monomers from polyubiquitinated chains. The diversity of DUB functions is illustrated by their number and variety of their catalytic domains with specific 3D architectures. DUBs can be divided into five subclasses: ubiquitin C-terminal hydrolases (UCHs), ubiquitin-specific proteases (USPs or UBPs), ovarian tumour proteases (OTUs), Machado-Joseph disease proteases (MJDs) and JAB1/MPN/Mov34 metalloenzymes (JAMMs).

methodsConsidering the role that the ubiquitin-proteasome system has been shown to play during the development of Schistosoma mansoni, our main goal was to identify and characterize SmUSPs. Here, we showed the identification of putative ubiquitin-specific proteases using bioinformatic approaches. We also evaluated the gene expression profile of representative USP family members using qRT-PCR.

resultsWe reported 17 USP family members in S. mansoni that present a conservation of UCH domains. Furthermore, the putative SmUSP transcripts analysed were detected in all investigated stages, showing distinct expression during S. mansoni development. The SmUSPs exhibiting high expression profiles were SmUSP7, SmUSP8, SmUSP9x and SmUSP24.

conclusionS. mansoni USPs showed changes in expression levels for different life cycle stages indicating their involvement in cellular processes required for S. mansoni development. These data will serve as a basis for future functional studies of USPs in this parasite.

Indexed as

Amino Acid SequenceAnimalsGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicHelminth ProteinsLife Cycle StagesMolecular Sequence DataMultigene FamilyPhylogenySchistosoma mansoniSequence AlignmentUbiquitin-Specific ProteasesHelminth ProteinsUbiquitin-Specific Proteases

Identifiers

PMID26112833
PMCPMC4485857
OpenAlexW1680652826

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.